Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 AF186996.4-201ENST00000467186 377 ntBASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 AC021087.4-201ENST00000563761 564 ntBASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 STK25P1-201ENST00000585406 838 ntBASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 AC148477.8-201ENST00000624298 468 ntBASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 LINC00304-203ENST00000565008 1864 ntBASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 AC003669.1-201ENST00000334569 611 ntBASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 AL662844.1-201ENST00000546340 181 ntBASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 AC064862.7-201ENST00000604520 867 ntBASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 LINC01451-201ENST00000623792 534 ntBASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 AC073592.4-201ENST00000623827 446 ntBASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SNX9Q9Y5X1 SIGLEC16-201ENST00000599858 1437 ntBASIC18.77■□□□□ 0.6
SNX9Q9Y5X1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX9Q9Y5X1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX9Q9Y5X1 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX9Q9Y5X1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX9Q9Y5X1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SNX9Q9Y5X1 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX9Q9Y5X1 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX9Q9Y5X1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SNX9Q9Y5X1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SNX9Q9Y5X1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.77■□□□□ 0.6
SNX9Q9Y5X1 MYCLP1-201ENST00000372451 1075 ntBASIC18.77■□□□□ 0.6
SNX9Q9Y5X1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SNX9Q9Y5X1 AL020989.1-201ENST00000422979 469 ntBASIC18.77■□□□□ 0.6
SNX9Q9Y5X1 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SNX9Q9Y5X1 STK19B-204ENST00000512515 211 ntBASIC18.77■□□□□ 0.6
SNX9Q9Y5X1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.77■□□□□ 0.6
SNX9Q9Y5X1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SNX9Q9Y5X1 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SNX9Q9Y5X1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.77■□□□□ 0.6
SNX9Q9Y5X1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX9Q9Y5X1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX9Q9Y5X1 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX9Q9Y5X1 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.77■□□□□ 0.6
SNX9Q9Y5X1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SNX9Q9Y5X1 AC148477.5-201ENST00000625164 1645 ntBASIC18.77■□□□□ 0.6
SNX9Q9Y5X1 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.77■□□□□ 0.59
SNX9Q9Y5X1 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SNX9Q9Y5X1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 AC018712.1-201ENST00000455767 687 ntBASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.76■□□□□ 0.59
SNX9Q9Y5X1 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms