Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.52
PCDHA3Q9Y5H8 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHA3Q9Y5H8 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PCDHA3Q9Y5H8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHA3Q9Y5H8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
PCDHA3Q9Y5H8 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PCDHA3Q9Y5H8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PCDHA3Q9Y5H8 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHA3Q9Y5H8 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHA3Q9Y5H8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHA3Q9Y5H8 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 AC007967.3-201ENST00000434308 558 ntBASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 AC093525.9-201ENST00000624961 1746 ntBASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA3Q9Y5H8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 MYCLP1-201ENST00000372451 1075 ntBASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 AC083849.1-201ENST00000615227 514 ntBASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHA3Q9Y5H8 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA3Q9Y5H8 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PCDHA3Q9Y5H8 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA3Q9Y5H8 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA3Q9Y5H8 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA3Q9Y5H8 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA3Q9Y5H8 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHA3Q9Y5H8 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA3Q9Y5H8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms