Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB13Q9Y5F0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHB13Q9Y5F0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHB13Q9Y5F0 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB13Q9Y5F0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB13Q9Y5F0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 INTS4P1-201ENST00000438455 1935 ntBASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 RCN1P2-201ENST00000398357 915 ntBASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 AC114341.1-201ENST00000618070 349 ntBASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB13Q9Y5F0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB13Q9Y5F0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHB13Q9Y5F0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB13Q9Y5F0 SIRPAP1-201ENST00000448467 1770 ntBASIC19.4■□□□□ 0.7
PCDHB13Q9Y5F0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB13Q9Y5F0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
PCDHB13Q9Y5F0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB13Q9Y5F0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB13Q9Y5F0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHB13Q9Y5F0 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC19.4■□□□□ 0.7
PCDHB13Q9Y5F0 NUS1P1-201ENST00000446295 882 ntBASIC19.4■□□□□ 0.7
PCDHB13Q9Y5F0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PCDHB13Q9Y5F0 IGHV3-52-201ENST00000519770 353 ntBASIC19.4■□□□□ 0.7
PCDHB13Q9Y5F0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHB13Q9Y5F0 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB13Q9Y5F0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
PCDHB13Q9Y5F0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB13Q9Y5F0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB13Q9Y5F0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB13Q9Y5F0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHB13Q9Y5F0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB13Q9Y5F0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB13Q9Y5F0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB13Q9Y5F0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHB13Q9Y5F0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PCDHB13Q9Y5F0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
PCDHB13Q9Y5F0 PP12613-201ENST00000424958 2230 ntBASIC19.39■□□□□ 0.69
PCDHB13Q9Y5F0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PCDHB13Q9Y5F0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB13Q9Y5F0 Z97985.1-201ENST00000332270 946 ntBASIC19.39■□□□□ 0.69
PCDHB13Q9Y5F0 MYCLP1-201ENST00000372451 1075 ntBASIC19.39■□□□□ 0.69
PCDHB13Q9Y5F0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB13Q9Y5F0 AC010740.1-201ENST00000417035 684 ntBASIC19.39■□□□□ 0.69
PCDHB13Q9Y5F0 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHB13Q9Y5F0 KRT16P4-201ENST00000453883 522 ntBASIC19.39■□□□□ 0.69
PCDHB13Q9Y5F0 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHB13Q9Y5F0 AC009712.1-201ENST00000564938 316 ntBASIC19.39■□□□□ 0.69
PCDHB13Q9Y5F0 AC109462.3-201ENST00000573934 613 ntBASIC19.39■□□□□ 0.69
PCDHB13Q9Y5F0 AC019129.2-201ENST00000609837 1235 ntBASIC19.39■□□□□ 0.69
PCDHB13Q9Y5F0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHB13Q9Y5F0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHB13Q9Y5F0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB13Q9Y5F0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB13Q9Y5F0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB13Q9Y5F0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PCDHB13Q9Y5F0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB13Q9Y5F0 AL049757.1-201ENST00000616842 1596 ntBASIC19.39■□□□□ 0.69
PCDHB13Q9Y5F0 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PCDHB13Q9Y5F0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB13Q9Y5F0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PCDHB13Q9Y5F0 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB13Q9Y5F0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHB13Q9Y5F0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PCDHB13Q9Y5F0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB13Q9Y5F0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB13Q9Y5F0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB13Q9Y5F0 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
PCDHB13Q9Y5F0 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PCDHB13Q9Y5F0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB13Q9Y5F0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDHB13Q9Y5F0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDHB13Q9Y5F0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms