Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 AL390955.1-201ENST00000428694 934 ntBASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 NEK4P2-201ENST00000580004 1012 ntBASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 FLJ38576-201ENST00000623820 2459 ntBASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBE2D4Q9Y2X8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 AC005915.1-201ENST00000624912 2018 ntBASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 AL512604.3-201ENST00000569583 964 ntBASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 AL157888.1-201ENST00000631930 593 ntBASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UBE2D4Q9Y2X8 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 KRT89P-201ENST00000620027 1478 ntBASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBE2D4Q9Y2X8 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms