Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 TSPY19P-201ENST00000418461 509 ntBASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 TSPY18P-201ENST00000441642 509 ntBASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 AC009078.2-202ENST00000463353 338 ntBASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 AC009533.2-201ENST00000543664 586 ntBASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 LINC01711-201ENST00000598340 967 ntBASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 AC009949.1-201ENST00000623048 1830 ntBASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 IFNL4P1-201ENST00000607083 540 ntBASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.13■□□□□ 0.17
RPH3AQ9Y2J0 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 POM121L3P-201ENST00000419331 1163 ntBASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 AL591684.3-201ENST00000605187 298 ntBASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 AC116407.2-201ENST00000613639 860 ntBASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 AC114341.1-201ENST00000618070 349 ntBASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.12■□□□□ 0.17
RPH3AQ9Y2J0 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms