Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 MIR3917-201ENST00000580971 93 ntBASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 AC066615.1-201ENST00000640911 628 ntBASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 AC106886.4-201ENST00000623557 2502 ntBASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGB4Q9UN71 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 KRT8P9-201ENST00000558927 1449 ntBASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 PCDHA14-201ENST00000506751 2298 ntBASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PCDHGB4Q9UN71 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB4Q9UN71 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms