Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 POM121L13P-201ENST00000422362 380 ntBASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 KLF2-202ENST00000592003 564 ntTSL 3 BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UBQLN2Q9UHD9 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 AC069544.1-201ENST00000609399 999 ntBASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.86□□□□□ -0.03
UBQLN2Q9UHD9 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
UBQLN2Q9UHD9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC14.84□□□□□ -0.03
UBQLN2Q9UHD9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBQLN2Q9UHD9 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBQLN2Q9UHD9 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBQLN2Q9UHD9 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBQLN2Q9UHD9 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.84□□□□□ -0.03
UBQLN2Q9UHD9 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms