Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.83■□□□□ 0.77
HDAC6Q9UBN7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HDAC6Q9UBN7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HDAC6Q9UBN7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.83■□□□□ 0.77
HDAC6Q9UBN7 BX842568.4-201ENST00000421222 227 ntBASIC19.83■□□□□ 0.77
HDAC6Q9UBN7 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.83■□□□□ 0.77
HDAC6Q9UBN7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.83■□□□□ 0.77
HDAC6Q9UBN7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.83■□□□□ 0.77
HDAC6Q9UBN7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HDAC6Q9UBN7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.83■□□□□ 0.77
HDAC6Q9UBN7 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.83■□□□□ 0.76
HDAC6Q9UBN7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
HDAC6Q9UBN7 AC093677.2-201ENST00000600169 1863 ntBASIC19.83■□□□□ 0.76
HDAC6Q9UBN7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HDAC6Q9UBN7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
HDAC6Q9UBN7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.83■□□□□ 0.76
HDAC6Q9UBN7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
HDAC6Q9UBN7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.83■□□□□ 0.76
HDAC6Q9UBN7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HDAC6Q9UBN7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HDAC6Q9UBN7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HDAC6Q9UBN7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HDAC6Q9UBN7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.82■□□□□ 0.76
HDAC6Q9UBN7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
HDAC6Q9UBN7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HDAC6Q9UBN7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.82■□□□□ 0.76
HDAC6Q9UBN7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
HDAC6Q9UBN7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HDAC6Q9UBN7 MIR1233-2-201ENST00000408138 82 ntBASIC19.82■□□□□ 0.76
HDAC6Q9UBN7 MIR1233-1-201ENST00000408722 82 ntBASIC19.82■□□□□ 0.76
HDAC6Q9UBN7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.82■□□□□ 0.76
HDAC6Q9UBN7 PGAM5P1-201ENST00000518923 814 ntBASIC19.82■□□□□ 0.76
HDAC6Q9UBN7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
HDAC6Q9UBN7 AC034105.1-201ENST00000563488 319 ntBASIC19.82■□□□□ 0.76
HDAC6Q9UBN7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.82■□□□□ 0.76
HDAC6Q9UBN7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.82■□□□□ 0.76
HDAC6Q9UBN7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.82■□□□□ 0.76
HDAC6Q9UBN7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
HDAC6Q9UBN7 AC008735.5-201ENST00000623544 497 ntBASIC19.82■□□□□ 0.76
HDAC6Q9UBN7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.82■□□□□ 0.76
HDAC6Q9UBN7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
HDAC6Q9UBN7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.82■□□□□ 0.76
HDAC6Q9UBN7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.82■□□□□ 0.76
HDAC6Q9UBN7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HDAC6Q9UBN7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HDAC6Q9UBN7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
HDAC6Q9UBN7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HDAC6Q9UBN7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.82■□□□□ 0.76
HDAC6Q9UBN7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 RNA5SP415-201ENST00000517246 115 ntBASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 AC140113.2-201ENST00000604370 208 ntBASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 AC027601.4-201ENST00000611259 610 ntBASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.81■□□□□ 0.76
HDAC6Q9UBN7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 GNAS-203ENST00000306120 1878 ntBASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms