Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 AC098831.1-202ENST00000438821 336 ntBASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 AC106730.1-201ENST00000566722 1090 ntBASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE7Q9UBL6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17■□□□□ 0.31
CPNE7Q9UBL6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17■□□□□ 0.31
CPNE7Q9UBL6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE7Q9UBL6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17■□□□□ 0.31
CPNE7Q9UBL6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17■□□□□ 0.31
CPNE7Q9UBL6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17■□□□□ 0.31
CPNE7Q9UBL6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE7Q9UBL6 AP002414.3-201ENST00000589352 1468 ntBASIC17■□□□□ 0.31
CPNE7Q9UBL6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CPNE7Q9UBL6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE7Q9UBL6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE7Q9UBL6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE7Q9UBL6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17■□□□□ 0.31
CPNE7Q9UBL6 MIR574-201ENST00000385209 96 ntBASIC17■□□□□ 0.31
CPNE7Q9UBL6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE7Q9UBL6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CPNE7Q9UBL6 PMS2P1-201ENST00000431037 1228 ntBASIC17■□□□□ 0.31
CPNE7Q9UBL6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE7Q9UBL6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17■□□□□ 0.31
CPNE7Q9UBL6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CPNE7Q9UBL6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CPNE7Q9UBL6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17■□□□□ 0.31
CPNE7Q9UBL6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE7Q9UBL6 CD63-204ENST00000546939 779 ntTSL 3 BASIC17■□□□□ 0.31
CPNE7Q9UBL6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17■□□□□ 0.31
CPNE7Q9UBL6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17■□□□□ 0.31
CPNE7Q9UBL6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17■□□□□ 0.31
CPNE7Q9UBL6 AL671883.3-201ENST00000603274 991 ntBASIC17■□□□□ 0.31
CPNE7Q9UBL6 AC009336.1-201ENST00000608941 1553 ntBASIC17■□□□□ 0.31
CPNE7Q9UBL6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17■□□□□ 0.31
CPNE7Q9UBL6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE7Q9UBL6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17■□□□□ 0.31
CPNE7Q9UBL6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE7Q9UBL6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE7Q9UBL6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE7Q9UBL6 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CPNE7Q9UBL6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17■□□□□ 0.31
CPNE7Q9UBL6 ZNF259P1-201ENST00000407656 1365 ntBASIC17■□□□□ 0.31
CPNE7Q9UBL6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE7Q9UBL6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE7Q9UBL6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPNE7Q9UBL6 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17■□□□□ 0.31
CPNE7Q9UBL6 REXO1L11P-201ENST00000620964 1927 ntBASIC17■□□□□ 0.31
CPNE7Q9UBL6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.99■□□□□ 0.31
CPNE7Q9UBL6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.99■□□□□ 0.31
CPNE7Q9UBL6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE7Q9UBL6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE7Q9UBL6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE7Q9UBL6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.99■□□□□ 0.31
CPNE7Q9UBL6 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE7Q9UBL6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE7Q9UBL6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CPNE7Q9UBL6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.99■□□□□ 0.31
CPNE7Q9UBL6 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE7Q9UBL6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms