Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 MIR3917-201ENST00000580971 93 ntBASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CALCOCO1Q9P1Z2 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 DOC2GP-204ENST00000639052 2548 ntBASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 AC079602.3-201ENST00000623931 403 ntBASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.21■□□□□ 0.67
CALCOCO1Q9P1Z2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.66
CALCOCO1Q9P1Z2 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.2■□□□□ 0.66
CALCOCO1Q9P1Z2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CALCOCO1Q9P1Z2 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CALCOCO1Q9P1Z2 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
CALCOCO1Q9P1Z2 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CALCOCO1Q9P1Z2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CALCOCO1Q9P1Z2 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.2■□□□□ 0.66
CALCOCO1Q9P1Z2 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CALCOCO1Q9P1Z2 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CALCOCO1Q9P1Z2 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.2■□□□□ 0.66
CALCOCO1Q9P1Z2 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.2■□□□□ 0.66
CALCOCO1Q9P1Z2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.2■□□□□ 0.66
CALCOCO1Q9P1Z2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.2■□□□□ 0.66
CALCOCO1Q9P1Z2 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CALCOCO1Q9P1Z2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.2■□□□□ 0.66
CALCOCO1Q9P1Z2 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CALCOCO1Q9P1Z2 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CALCOCO1Q9P1Z2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CALCOCO1Q9P1Z2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CALCOCO1Q9P1Z2 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CALCOCO1Q9P1Z2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.2■□□□□ 0.66
CALCOCO1Q9P1Z2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CALCOCO1Q9P1Z2 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CALCOCO1Q9P1Z2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.2■□□□□ 0.66
CALCOCO1Q9P1Z2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CALCOCO1Q9P1Z2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALCOCO1Q9P1Z2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALCOCO1Q9P1Z2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CALCOCO1Q9P1Z2 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CALCOCO1Q9P1Z2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALCOCO1Q9P1Z2 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC19.19■□□□□ 0.66
CALCOCO1Q9P1Z2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.19■□□□□ 0.66
CALCOCO1Q9P1Z2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CALCOCO1Q9P1Z2 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms