Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 AL671883.3-201ENST00000603274 991 ntBASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 AC107918.4-202ENST00000641623 219 ntBASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
HMG20BQ9P0W2 REXO1L11P-201ENST00000620964 1927 ntBASIC21.35■■□□□ 1.01
HMG20BQ9P0W2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC21.35■■□□□ 1.01
HMG20BQ9P0W2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
HMG20BQ9P0W2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
HMG20BQ9P0W2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21.35■■□□□ 1.01
HMG20BQ9P0W2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
HMG20BQ9P0W2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21.35■■□□□ 1.01
HMG20BQ9P0W2 STK25P1-201ENST00000585406 838 ntBASIC21.35■■□□□ 1.01
HMG20BQ9P0W2 AF228730.7-201ENST00000641842 219 ntBASIC21.35■■□□□ 1.01
HMG20BQ9P0W2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HMG20BQ9P0W2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.35■■□□□ 1.01
HMG20BQ9P0W2 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
HMG20BQ9P0W2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HMG20BQ9P0W2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HMG20BQ9P0W2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
HMG20BQ9P0W2 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
HMG20BQ9P0W2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.34■■□□□ 1.01
HMG20BQ9P0W2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.34■■□□□ 1.01
HMG20BQ9P0W2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMG20BQ9P0W2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HMG20BQ9P0W2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.34■■□□□ 1.01
HMG20BQ9P0W2 RPS2P28-201ENST00000314255 741 ntBASIC21.34■■□□□ 1.01
HMG20BQ9P0W2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMG20BQ9P0W2 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
HMG20BQ9P0W2 CSF3-203ENST00000394148 622 ntTSL 3 BASIC21.34■■□□□ 1.01
HMG20BQ9P0W2 AL020989.1-201ENST00000422979 469 ntBASIC21.34■■□□□ 1.01
HMG20BQ9P0W2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
HMG20BQ9P0W2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC21.34■■□□□ 1.01
HMG20BQ9P0W2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC21.34■■□□□ 1.01
HMG20BQ9P0W2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
HMG20BQ9P0W2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMG20BQ9P0W2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.34■■□□□ 1.01
HMG20BQ9P0W2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMG20BQ9P0W2 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMG20BQ9P0W2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
HMG20BQ9P0W2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC21.34■■□□□ 1.01
HMG20BQ9P0W2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMG20BQ9P0W2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMG20BQ9P0W2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMG20BQ9P0W2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HMG20BQ9P0W2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
HMG20BQ9P0W2 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
HMG20BQ9P0W2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
HMG20BQ9P0W2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HMG20BQ9P0W2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HMG20BQ9P0W2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HMG20BQ9P0W2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.33■■□□□ 1.01
HMG20BQ9P0W2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC21.33■■□□□ 1.01
HMG20BQ9P0W2 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HMG20BQ9P0W2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HMG20BQ9P0W2 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
HMG20BQ9P0W2 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC21.33■■□□□ 1.01
HMG20BQ9P0W2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HMG20BQ9P0W2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.33■■□□□ 1.01
HMG20BQ9P0W2 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC21.33■■□□□ 1.01
HMG20BQ9P0W2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC21.33■■□□□ 1.01
HMG20BQ9P0W2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC21.33■■□□□ 1.01
HMG20BQ9P0W2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC21.33■■□□□ 1.01
HMG20BQ9P0W2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.33■■□□□ 1.01
HMG20BQ9P0W2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HMG20BQ9P0W2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC21.33■■□□□ 1.01
HMG20BQ9P0W2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC21.33■■□□□ 1.01
HMG20BQ9P0W2 AC008735.5-201ENST00000623544 497 ntBASIC21.33■■□□□ 1.01
HMG20BQ9P0W2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC21.33■■□□□ 1.01
HMG20BQ9P0W2 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
HMG20BQ9P0W2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.33■■□□□ 1
HMG20BQ9P0W2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
HMG20BQ9P0W2 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.33■■□□□ 1
HMG20BQ9P0W2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
HMG20BQ9P0W2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1
HMG20BQ9P0W2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
HMG20BQ9P0W2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
HMG20BQ9P0W2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
HMG20BQ9P0W2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.32■■□□□ 1
HMG20BQ9P0W2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
HMG20BQ9P0W2 AC026471.1-201ENST00000564629 3026 ntBASIC21.32■■□□□ 1
HMG20BQ9P0W2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.32■■□□□ 1
HMG20BQ9P0W2 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC21.32■■□□□ 1
HMG20BQ9P0W2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms