Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RLIMQ9NVW2 Z83836.1-201ENST00000624605 1642 ntBASIC16.37■□□□□ 0.21
RLIMQ9NVW2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RLIMQ9NVW2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RLIMQ9NVW2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RLIMQ9NVW2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RLIMQ9NVW2 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.37■□□□□ 0.21
RLIMQ9NVW2 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RLIMQ9NVW2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.37■□□□□ 0.21
RLIMQ9NVW2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.37■□□□□ 0.21
RLIMQ9NVW2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RLIMQ9NVW2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
RLIMQ9NVW2 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.37■□□□□ 0.21
RLIMQ9NVW2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.37■□□□□ 0.21
RLIMQ9NVW2 AC083849.1-201ENST00000615227 514 ntBASIC16.37■□□□□ 0.21
RLIMQ9NVW2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RLIMQ9NVW2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.37■□□□□ 0.21
RLIMQ9NVW2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.37■□□□□ 0.21
RLIMQ9NVW2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
RLIMQ9NVW2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.37■□□□□ 0.21
RLIMQ9NVW2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
RLIMQ9NVW2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.37■□□□□ 0.21
RLIMQ9NVW2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RLIMQ9NVW2 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RLIMQ9NVW2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RLIMQ9NVW2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RLIMQ9NVW2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RLIMQ9NVW2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RLIMQ9NVW2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.37■□□□□ 0.21
RLIMQ9NVW2 AC018695.7-201ENST00000624587 2492 ntBASIC16.37■□□□□ 0.21
RLIMQ9NVW2 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RLIMQ9NVW2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 MTCL1P1-201ENST00000446207 792 ntBASIC16.36■□□□□ 0.21
RLIMQ9NVW2 AC068472.1-201ENST00000474589 881 ntBASIC16.36■□□□□ 0.21
RLIMQ9NVW2 DUX4L26-201ENST00000489078 1255 ntBASIC16.36■□□□□ 0.21
RLIMQ9NVW2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 AC022616.7-201ENST00000525383 220 ntBASIC16.36■□□□□ 0.21
RLIMQ9NVW2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 AL390719.2-201ENST00000606993 987 ntBASIC16.36■□□□□ 0.21
RLIMQ9NVW2 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 AGGF1P2-201ENST00000426656 2106 ntBASIC16.36■□□□□ 0.21
RLIMQ9NVW2 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RLIMQ9NVW2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
RLIMQ9NVW2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms