Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ABCF3Q9NUQ8 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.9■□□□□ 0.46
ABCF3Q9NUQ8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ABCF3Q9NUQ8 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.9■□□□□ 0.46
ABCF3Q9NUQ8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ABCF3Q9NUQ8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.9■□□□□ 0.46
ABCF3Q9NUQ8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ABCF3Q9NUQ8 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.9■□□□□ 0.46
ABCF3Q9NUQ8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.9■□□□□ 0.46
ABCF3Q9NUQ8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
ABCF3Q9NUQ8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
ABCF3Q9NUQ8 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.46
ABCF3Q9NUQ8 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
ABCF3Q9NUQ8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ABCF3Q9NUQ8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
ABCF3Q9NUQ8 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ABCF3Q9NUQ8 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ABCF3Q9NUQ8 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.89■□□□□ 0.45
ABCF3Q9NUQ8 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCF3Q9NUQ8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ABCF3Q9NUQ8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.89■□□□□ 0.45
ABCF3Q9NUQ8 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
ABCF3Q9NUQ8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCF3Q9NUQ8 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.89■□□□□ 0.45
ABCF3Q9NUQ8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
ABCF3Q9NUQ8 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCF3Q9NUQ8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ABCF3Q9NUQ8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
ABCF3Q9NUQ8 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ABCF3Q9NUQ8 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.89■□□□□ 0.45
ABCF3Q9NUQ8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.89■□□□□ 0.45
ABCF3Q9NUQ8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCF3Q9NUQ8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
ABCF3Q9NUQ8 RN7SL850P-201ENST00000579959 291 ntBASIC17.89■□□□□ 0.45
ABCF3Q9NUQ8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ABCF3Q9NUQ8 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
ABCF3Q9NUQ8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCF3Q9NUQ8 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCF3Q9NUQ8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
ABCF3Q9NUQ8 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
ABCF3Q9NUQ8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCF3Q9NUQ8 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCF3Q9NUQ8 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCF3Q9NUQ8 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCF3Q9NUQ8 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ABCF3Q9NUQ8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCF3Q9NUQ8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 COX11P1-201ENST00000489116 835 ntBASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 KRT18P41-201ENST00000518924 1277 ntBASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 GCSHP2-201ENST00000560971 527 ntBASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCF3Q9NUQ8 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ABCF3Q9NUQ8 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.87■□□□□ 0.45
ABCF3Q9NUQ8 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.87■□□□□ 0.45
ABCF3Q9NUQ8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ABCF3Q9NUQ8 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ABCF3Q9NUQ8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.87■□□□□ 0.45
ABCF3Q9NUQ8 PCDHA1-201ENST00000378133 2726 ntBASIC17.87■□□□□ 0.45
ABCF3Q9NUQ8 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.87■□□□□ 0.45
ABCF3Q9NUQ8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ABCF3Q9NUQ8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ABCF3Q9NUQ8 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ABCF3Q9NUQ8 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.87■□□□□ 0.45
ABCF3Q9NUQ8 AP000593.1-201ENST00000393668 712 ntBASIC17.87■□□□□ 0.45
ABCF3Q9NUQ8 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.87■□□□□ 0.45
ABCF3Q9NUQ8 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.87■□□□□ 0.45
ABCF3Q9NUQ8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.87■□□□□ 0.45
ABCF3Q9NUQ8 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.87■□□□□ 0.45
ABCF3Q9NUQ8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.87■□□□□ 0.45
ABCF3Q9NUQ8 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
ABCF3Q9NUQ8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.87■□□□□ 0.45
ABCF3Q9NUQ8 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms