Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 AL390955.1-201ENST00000428694 934 ntBASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 PVRIG2P-201ENST00000435460 978 ntBASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 MIR3917-201ENST00000580971 93 ntBASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 AC024243.1-201ENST00000609234 778 ntBASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 AL023806.1-201ENST00000603994 1649 ntBASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 AC133963.1-201ENST00000504166 1679 ntBASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 AC022211.2-201ENST00000585075 2527 ntBASIC15.31■□□□□ 0.04
PCDHB16Q9NRJ7 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 AC009947.2-201ENST00000444014 672 ntBASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 AC113404.2-201ENST00000507884 177 ntBASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 AL138688.1-201ENST00000624851 1594 ntBASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHB16Q9NRJ7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHB16Q9NRJ7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms