Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 AC016396.2-201ENST00000562575 1417 ntBASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NEUROD4Q9HD90 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 LYSMD4-203ENST00000378904 2122 ntBASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 AL121894.2-201ENST00000602977 491 ntBASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.59■□□□□ 0.25
NEUROD4Q9HD90 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NEUROD4Q9HD90 AP001094.4-201ENST00000579008 2176 ntBASIC16.58■□□□□ 0.25
NEUROD4Q9HD90 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NEUROD4Q9HD90 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.58■□□□□ 0.25
NEUROD4Q9HD90 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NEUROD4Q9HD90 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NEUROD4Q9HD90 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 COX5BP2-201ENST00000392354 334 ntBASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 AL121956.5-201ENST00000625261 221 ntBASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms