Protein–RNA interactions for Protein: Q9HCU9

BRMS1, Breast cancer metastasis-suppressor 1, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRMS1Q9HCU9 NPAP1P7-201ENST00000613027 823 ntBASIC20.28■□□□□ 0.84
BRMS1Q9HCU9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRMS1Q9HCU9 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRMS1Q9HCU9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.28■□□□□ 0.84
BRMS1Q9HCU9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
BRMS1Q9HCU9 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
BRMS1Q9HCU9 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BRMS1Q9HCU9 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.28■□□□□ 0.84
BRMS1Q9HCU9 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
BRMS1Q9HCU9 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
BRMS1Q9HCU9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRMS1Q9HCU9 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRMS1Q9HCU9 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BRMS1Q9HCU9 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 AC103564.2-201ENST00000432853 1299 ntBASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 AC104819.1-201ENST00000504587 486 ntBASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 IGHV3-52-201ENST00000519770 353 ntBASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 AP000867.3-201ENST00000524675 377 ntBASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 MIR3180-1-201ENST00000580374 94 ntBASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 MIR3180-3-201ENST00000584616 94 ntBASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 AC092329.2-201ENST00000598402 547 ntBASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BRMS1Q9HCU9 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
BRMS1Q9HCU9 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
BRMS1Q9HCU9 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
BRMS1Q9HCU9 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.27■□□□□ 0.83
BRMS1Q9HCU9 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.27■□□□□ 0.83
BRMS1Q9HCU9 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
BRMS1Q9HCU9 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
BRMS1Q9HCU9 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 MYCLP1-201ENST00000372451 1075 ntBASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 UPK3BP1-201ENST00000428678 509 ntBASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 AC074051.2-201ENST00000565115 352 ntBASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 AC092119.3-201ENST00000612618 583 ntBASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 NSUN5P1-202ENST00000421140 1535 ntBASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 NSUN5P2-203ENST00000457352 1529 ntBASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
BRMS1Q9HCU9 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
BRMS1Q9HCU9 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRMS1Q9HCU9 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRMS1Q9HCU9 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.25■□□□□ 0.83
BRMS1Q9HCU9 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.25■□□□□ 0.83
BRMS1Q9HCU9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
BRMS1Q9HCU9 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRMS1Q9HCU9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
BRMS1Q9HCU9 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.25■□□□□ 0.83
BRMS1Q9HCU9 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms