Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 AC007967.3-201ENST00000434308 558 ntBASIC15.37■□□□□ 0.05
CDH20Q9HBT6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 TP73-AS1-210ENST00000637775 1455 ntBASIC15.37■□□□□ 0.05
CDH20Q9HBT6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.37■□□□□ 0.05
CDH20Q9HBT6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 NUS1P1-201ENST00000446295 882 ntBASIC15.36■□□□□ 0.05
CDH20Q9HBT6 FOSL1P1-201ENST00000511041 816 ntBASIC15.36■□□□□ 0.05
CDH20Q9HBT6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 BNIP3P18-201ENST00000593976 575 ntBASIC15.36■□□□□ 0.05
CDH20Q9HBT6 AL121772.3-201ENST00000610840 674 ntBASIC15.36■□□□□ 0.05
CDH20Q9HBT6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.36■□□□□ 0.05
CDH20Q9HBT6 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH20Q9HBT6 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms