Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 RPS6P14-201ENST00000425165 719 ntBASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 GCSHP5-201ENST00000443090 522 ntBASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 AC117500.1-201ENST00000497352 755 ntBASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 TMF1P1-201ENST00000576058 373 ntBASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 TK1-205ENST00000590862 642 ntTSL 3 BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 AL139327.4-201ENST00000612362 153 ntBASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 AC006449.5-201ENST00000610658 2098 ntBASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP3-1Q9BYR8 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 CYP2D8P-201ENST00000433633 1490 ntBASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 FUK-207ENST00000571514 3054 ntTSL 2 BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 MIR1238-201ENST00000408483 83 ntBASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 AL158047.1-201ENST00000445918 881 ntBASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 TSPY20P-201ENST00000450910 630 ntBASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 FAM201B-201ENST00000458407 597 ntBASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 USP9YP2-201ENST00000504503 1000 ntBASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 USP9YP1-201ENST00000513521 1002 ntBASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 AC026616.1-201ENST00000523157 525 ntBASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 AC135178.5-201ENST00000602597 674 ntBASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 AC092865.7-201ENST00000641832 219 ntBASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC8.91□□□□□ -0.98
KRTAP3-1Q9BYR8 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC8.91□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms