Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.33■□□□□ 0.37
LRFN3Q9BTN0 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.33■□□□□ 0.37
LRFN3Q9BTN0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
LRFN3Q9BTN0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
LRFN3Q9BTN0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LRFN3Q9BTN0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRFN3Q9BTN0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRFN3Q9BTN0 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRFN3Q9BTN0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRFN3Q9BTN0 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.33■□□□□ 0.36
LRFN3Q9BTN0 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.33■□□□□ 0.36
LRFN3Q9BTN0 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRFN3Q9BTN0 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRFN3Q9BTN0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.33■□□□□ 0.36
LRFN3Q9BTN0 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.33■□□□□ 0.36
LRFN3Q9BTN0 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.33■□□□□ 0.36
LRFN3Q9BTN0 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.33■□□□□ 0.36
LRFN3Q9BTN0 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LRFN3Q9BTN0 CHCHD2P3-201ENST00000603038 451 ntBASIC17.33■□□□□ 0.36
LRFN3Q9BTN0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
LRFN3Q9BTN0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRFN3Q9BTN0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRFN3Q9BTN0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRFN3Q9BTN0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 AC132938.6-201ENST00000623828 1655 ntBASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 AC099778.1-201ENST00000568593 1911 ntBASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 AC099548.2-209ENST00000480264 625 ntBASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 AP000842.3-202ENST00000569238 1080 ntBASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 STK25P1-201ENST00000585406 838 ntBASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRFN3Q9BTN0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN3Q9BTN0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN3Q9BTN0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN3Q9BTN0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN3Q9BTN0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
LRFN3Q9BTN0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN3Q9BTN0 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN3Q9BTN0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.31■□□□□ 0.36
LRFN3Q9BTN0 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN3Q9BTN0 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.31■□□□□ 0.36
LRFN3Q9BTN0 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.31■□□□□ 0.36
LRFN3Q9BTN0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.31■□□□□ 0.36
LRFN3Q9BTN0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.31■□□□□ 0.36
LRFN3Q9BTN0 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
LRFN3Q9BTN0 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.31■□□□□ 0.36
LRFN3Q9BTN0 AC109462.3-201ENST00000573934 613 ntBASIC17.31■□□□□ 0.36
LRFN3Q9BTN0 AC008735.3-201ENST00000596646 500 ntBASIC17.31■□□□□ 0.36
LRFN3Q9BTN0 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
LRFN3Q9BTN0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN3Q9BTN0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.31■□□□□ 0.36
LRFN3Q9BTN0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.31■□□□□ 0.36
LRFN3Q9BTN0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN3Q9BTN0 AC026310.3-201ENST00000625186 2373 ntBASIC17.31■□□□□ 0.36
LRFN3Q9BTN0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN3Q9BTN0 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRFN3Q9BTN0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
LRFN3Q9BTN0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
LRFN3Q9BTN0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LRFN3Q9BTN0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.31■□□□□ 0.36
LRFN3Q9BTN0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms