Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SCAF11Q99590 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SCAF11Q99590 GK-202ENST00000378941 458 ntTSL 3 BASIC24.99■■□□□ 1.59
SCAF11Q99590 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC24.99■■□□□ 1.59
SCAF11Q99590 HFE2-206ENST00000634927 506 ntTSL 4 BASIC24.99■■□□□ 1.59
SCAF11Q99590 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SCAF11Q99590 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SCAF11Q99590 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
SCAF11Q99590 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SCAF11Q99590 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC24.99■■□□□ 1.59
SCAF11Q99590 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC24.99■■□□□ 1.59
SCAF11Q99590 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC24.99■■□□□ 1.59
SCAF11Q99590 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SCAF11Q99590 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
SCAF11Q99590 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SCAF11Q99590 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SCAF11Q99590 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SCAF11Q99590 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SCAF11Q99590 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
SCAF11Q99590 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SCAF11Q99590 STK19B-204ENST00000512515 211 ntBASIC24.98■■□□□ 1.59
SCAF11Q99590 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC24.98■■□□□ 1.59
SCAF11Q99590 AC109462.3-201ENST00000573934 613 ntBASIC24.98■■□□□ 1.59
SCAF11Q99590 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SCAF11Q99590 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC24.98■■□□□ 1.59
SCAF11Q99590 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC24.98■■□□□ 1.59
SCAF11Q99590 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC24.98■■□□□ 1.59
SCAF11Q99590 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SCAF11Q99590 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SCAF11Q99590 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SCAF11Q99590 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
SCAF11Q99590 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
SCAF11Q99590 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SCAF11Q99590 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SCAF11Q99590 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SCAF11Q99590 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SCAF11Q99590 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SCAF11Q99590 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC24.97■■□□□ 1.59
SCAF11Q99590 HNRNPFP1-201ENST00000391730 1133 ntBASIC24.97■■□□□ 1.59
SCAF11Q99590 FALEC-201ENST00000416894 566 ntTSL 3 BASIC24.97■■□□□ 1.59
SCAF11Q99590 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC24.97■■□□□ 1.59
SCAF11Q99590 UGT1A2P-201ENST00000454886 866 ntBASIC24.97■■□□□ 1.59
SCAF11Q99590 INGX-202ENST00000489074 768 ntBASIC24.97■■□□□ 1.59
SCAF11Q99590 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC24.97■■□□□ 1.59
SCAF11Q99590 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC24.97■■□□□ 1.59
SCAF11Q99590 TMED1-207ENST00000591695 809 ntTSL 5 BASIC24.97■■□□□ 1.59
SCAF11Q99590 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
SCAF11Q99590 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
SCAF11Q99590 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC24.97■■□□□ 1.59
SCAF11Q99590 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
SCAF11Q99590 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC24.97■■□□□ 1.59
SCAF11Q99590 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC24.97■■□□□ 1.59
SCAF11Q99590 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SCAF11Q99590 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SCAF11Q99590 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC24.97■■□□□ 1.59
SCAF11Q99590 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SCAF11Q99590 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC24.96■■□□□ 1.59
SCAF11Q99590 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC24.96■■□□□ 1.59
SCAF11Q99590 AC055876.3-201ENST00000431496 288 ntBASIC24.96■■□□□ 1.59
SCAF11Q99590 OARD1-208ENST00000469104 704 ntTSL 2 BASIC24.96■■□□□ 1.59
SCAF11Q99590 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC24.96■■□□□ 1.59
SCAF11Q99590 AC138649.4-201ENST00000612222 287 ntBASIC24.96■■□□□ 1.59
SCAF11Q99590 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
SCAF11Q99590 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC24.96■■□□□ 1.59
SCAF11Q99590 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
SCAF11Q99590 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
SCAF11Q99590 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC24.96■■□□□ 1.59
SCAF11Q99590 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SCAF11Q99590 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC24.96■■□□□ 1.59
SCAF11Q99590 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
SCAF11Q99590 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC24.96■■□□□ 1.59
SCAF11Q99590 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
SCAF11Q99590 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
SCAF11Q99590 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
SCAF11Q99590 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SCAF11Q99590 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SCAF11Q99590 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SCAF11Q99590 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC24.96■■□□□ 1.59
SCAF11Q99590 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC24.96■■□□□ 1.59
SCAF11Q99590 KRT8P48-201ENST00000515599 1220 ntBASIC24.96■■□□□ 1.59
SCAF11Q99590 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC24.96■■□□□ 1.59
SCAF11Q99590 AC026120.1-201ENST00000611536 926 ntBASIC24.96■■□□□ 1.59
SCAF11Q99590 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
SCAF11Q99590 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC24.95■■□□□ 1.59
SCAF11Q99590 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC24.95■■□□□ 1.59
SCAF11Q99590 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SCAF11Q99590 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SCAF11Q99590 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC24.95■■□□□ 1.58
SCAF11Q99590 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC24.95■■□□□ 1.58
SCAF11Q99590 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SCAF11Q99590 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SCAF11Q99590 FLJ13224-201ENST00000313737 1514 ntBASIC24.95■■□□□ 1.58
SCAF11Q99590 AC009949.1-201ENST00000623048 1830 ntBASIC24.95■■□□□ 1.58
SCAF11Q99590 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SCAF11Q99590 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SCAF11Q99590 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SCAF11Q99590 FAM207CP-201ENST00000443486 507 ntBASIC24.95■■□□□ 1.58
SCAF11Q99590 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
SCAF11Q99590 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC24.95■■□□□ 1.58
SCAF11Q99590 MEIS3P1-201ENST00000495167 958 ntBASIC24.95■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms