Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.76■□□□□ 0.59
YME1L1Q96TA2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.76■□□□□ 0.59
YME1L1Q96TA2 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
YME1L1Q96TA2 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YME1L1Q96TA2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.76■□□□□ 0.59
YME1L1Q96TA2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
YME1L1Q96TA2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
YME1L1Q96TA2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 DDX43P3-201ENST00000441064 443 ntBASIC18.75■□□□□ 0.59
YME1L1Q96TA2 BCRP1-201ENST00000444246 691 ntBASIC18.75■□□□□ 0.59
YME1L1Q96TA2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 AC025678.2-201ENST00000562061 970 ntBASIC18.75■□□□□ 0.59
YME1L1Q96TA2 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 AL096865.1-201ENST00000606796 927 ntBASIC18.75■□□□□ 0.59
YME1L1Q96TA2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 AC105339.1-204ENST00000636249 355 ntBASIC18.75■□□□□ 0.59
YME1L1Q96TA2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.75■□□□□ 0.59
YME1L1Q96TA2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 REXO1L3P-201ENST00000622202 1288 ntBASIC18.74■□□□□ 0.59
YME1L1Q96TA2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
YME1L1Q96TA2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
YME1L1Q96TA2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.73■□□□□ 0.59
YME1L1Q96TA2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
YME1L1Q96TA2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
YME1L1Q96TA2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
YME1L1Q96TA2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
YME1L1Q96TA2 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
YME1L1Q96TA2 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
YME1L1Q96TA2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
YME1L1Q96TA2 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
YME1L1Q96TA2 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
YME1L1Q96TA2 MYCLP1-201ENST00000372451 1075 ntBASIC18.73■□□□□ 0.59
YME1L1Q96TA2 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
YME1L1Q96TA2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
YME1L1Q96TA2 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
YME1L1Q96TA2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.73■□□□□ 0.59
YME1L1Q96TA2 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.73■□□□□ 0.59
YME1L1Q96TA2 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.73■□□□□ 0.59
YME1L1Q96TA2 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.73■□□□□ 0.59
YME1L1Q96TA2 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
YME1L1Q96TA2 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms