Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SYNGAP1Q96PV0 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.9■□□□□ 0.78
SYNGAP1Q96PV0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.9■□□□□ 0.78
SYNGAP1Q96PV0 HCG4B-203ENST00000450128 991 ntBASIC19.9■□□□□ 0.78
SYNGAP1Q96PV0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.9■□□□□ 0.78
SYNGAP1Q96PV0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.9■□□□□ 0.78
SYNGAP1Q96PV0 AC005829.1-201ENST00000570002 483 ntBASIC19.9■□□□□ 0.78
SYNGAP1Q96PV0 MIR4751-201ENST00000578027 74 ntBASIC19.9■□□□□ 0.78
SYNGAP1Q96PV0 MIR3197-201ENST00000582241 73 ntBASIC19.9■□□□□ 0.78
SYNGAP1Q96PV0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SYNGAP1Q96PV0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYNGAP1Q96PV0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SYNGAP1Q96PV0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYNGAP1Q96PV0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SYNGAP1Q96PV0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SYNGAP1Q96PV0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SYNGAP1Q96PV0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SYNGAP1Q96PV0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
SYNGAP1Q96PV0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.89■□□□□ 0.78
SYNGAP1Q96PV0 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
SYNGAP1Q96PV0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
SYNGAP1Q96PV0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.89■□□□□ 0.78
SYNGAP1Q96PV0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNGAP1Q96PV0 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNGAP1Q96PV0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNGAP1Q96PV0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.89■□□□□ 0.77
SYNGAP1Q96PV0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SYNGAP1Q96PV0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SYNGAP1Q96PV0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNGAP1Q96PV0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNGAP1Q96PV0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNGAP1Q96PV0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.89■□□□□ 0.77
SYNGAP1Q96PV0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNGAP1Q96PV0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.89■□□□□ 0.77
SYNGAP1Q96PV0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.89■□□□□ 0.77
SYNGAP1Q96PV0 AC027796.2-201ENST00000575326 344 ntBASIC19.89■□□□□ 0.77
SYNGAP1Q96PV0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.89■□□□□ 0.77
SYNGAP1Q96PV0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNGAP1Q96PV0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNGAP1Q96PV0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNGAP1Q96PV0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SYNGAP1Q96PV0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.89■□□□□ 0.77
SYNGAP1Q96PV0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SYNGAP1Q96PV0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SYNGAP1Q96PV0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SYNGAP1Q96PV0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.89■□□□□ 0.77
SYNGAP1Q96PV0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNGAP1Q96PV0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNGAP1Q96PV0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.88■□□□□ 0.77
SYNGAP1Q96PV0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SYNGAP1Q96PV0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.88■□□□□ 0.77
SYNGAP1Q96PV0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.88■□□□□ 0.77
SYNGAP1Q96PV0 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SYNGAP1Q96PV0 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.88■□□□□ 0.77
SYNGAP1Q96PV0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.88■□□□□ 0.77
SYNGAP1Q96PV0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.88■□□□□ 0.77
SYNGAP1Q96PV0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.88■□□□□ 0.77
SYNGAP1Q96PV0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.88■□□□□ 0.77
SYNGAP1Q96PV0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.88■□□□□ 0.77
SYNGAP1Q96PV0 AC116407.2-201ENST00000613639 860 ntBASIC19.88■□□□□ 0.77
SYNGAP1Q96PV0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
SYNGAP1Q96PV0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.88■□□□□ 0.77
SYNGAP1Q96PV0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SYNGAP1Q96PV0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNGAP1Q96PV0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNGAP1Q96PV0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.88■□□□□ 0.77
SYNGAP1Q96PV0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SYNGAP1Q96PV0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.88■□□□□ 0.77
SYNGAP1Q96PV0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNGAP1Q96PV0 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNGAP1Q96PV0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNGAP1Q96PV0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNGAP1Q96PV0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 AP000997.3-201ENST00000623333 2250 ntBASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 STK25P1-201ENST00000585406 838 ntBASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 AL805961.1-202ENST00000641562 540 ntBASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 AC092865.6-201ENST00000642101 219 ntBASIC19.87■□□□□ 0.77
SYNGAP1Q96PV0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms