Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC17Q96LX7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC17Q96LX7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC17Q96LX7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.4■□□□□ 0.86
CCDC17Q96LX7 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.4■□□□□ 0.86
CCDC17Q96LX7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC17Q96LX7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC17Q96LX7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.4■□□□□ 0.86
CCDC17Q96LX7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CCDC17Q96LX7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CCDC17Q96LX7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.4■□□□□ 0.86
CCDC17Q96LX7 AL590787.1-201ENST00000568856 1315 ntBASIC20.4■□□□□ 0.86
CCDC17Q96LX7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
CCDC17Q96LX7 AC004790.2-201ENST00000623588 572 ntBASIC20.4■□□□□ 0.86
CCDC17Q96LX7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC17Q96LX7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
CCDC17Q96LX7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC17Q96LX7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC17Q96LX7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CCDC17Q96LX7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC17Q96LX7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC17Q96LX7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC17Q96LX7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC17Q96LX7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC17Q96LX7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC17Q96LX7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC17Q96LX7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.39■□□□□ 0.85
CCDC17Q96LX7 AC004832.2-201ENST00000426397 482 ntBASIC20.39■□□□□ 0.85
CCDC17Q96LX7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC17Q96LX7 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC17Q96LX7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.39■□□□□ 0.85
CCDC17Q96LX7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC17Q96LX7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.39■□□□□ 0.85
CCDC17Q96LX7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC17Q96LX7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CCDC17Q96LX7 MIR4751-201ENST00000578027 74 ntBASIC20.39■□□□□ 0.85
CCDC17Q96LX7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC17Q96LX7 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.39■□□□□ 0.85
CCDC17Q96LX7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CCDC17Q96LX7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC17Q96LX7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC17Q96LX7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC17Q96LX7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
CCDC17Q96LX7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC17Q96LX7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC17Q96LX7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CCDC17Q96LX7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC17Q96LX7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC17Q96LX7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC17Q96LX7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC17Q96LX7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC17Q96LX7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CCDC17Q96LX7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC17Q96LX7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CCDC17Q96LX7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC17Q96LX7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC17Q96LX7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.38■□□□□ 0.85
CCDC17Q96LX7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC17Q96LX7 MRPL20P1-201ENST00000400819 433 ntBASIC20.38■□□□□ 0.85
CCDC17Q96LX7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CCDC17Q96LX7 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.38■□□□□ 0.85
CCDC17Q96LX7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC17Q96LX7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC17Q96LX7 HCG4B-203ENST00000450128 991 ntBASIC20.38■□□□□ 0.85
CCDC17Q96LX7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.38■□□□□ 0.85
CCDC17Q96LX7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC17Q96LX7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC17Q96LX7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.38■□□□□ 0.85
CCDC17Q96LX7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC17Q96LX7 AC002347.1-201ENST00000569543 541 ntBASIC20.38■□□□□ 0.85
CCDC17Q96LX7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.38■□□□□ 0.85
CCDC17Q96LX7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC17Q96LX7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC17Q96LX7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC17Q96LX7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC17Q96LX7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC17Q96LX7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC17Q96LX7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC17Q96LX7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC17Q96LX7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC17Q96LX7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC17Q96LX7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC17Q96LX7 YBX2P1-201ENST00000394192 760 ntBASIC20.37■□□□□ 0.85
CCDC17Q96LX7 MIR1233-2-201ENST00000408138 82 ntBASIC20.37■□□□□ 0.85
CCDC17Q96LX7 MIR1233-1-201ENST00000408722 82 ntBASIC20.37■□□□□ 0.85
CCDC17Q96LX7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC17Q96LX7 DNAJB3-201ENST00000446806 729 ntBASIC20.37■□□□□ 0.85
CCDC17Q96LX7 KRT18P2-201ENST00000447938 1258 ntBASIC20.37■□□□□ 0.85
CCDC17Q96LX7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
CCDC17Q96LX7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC17Q96LX7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC17Q96LX7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC17Q96LX7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC17Q96LX7 AC010654.1-201ENST00000615722 808 ntBASIC20.37■□□□□ 0.85
CCDC17Q96LX7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC17Q96LX7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CCDC17Q96LX7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC17Q96LX7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC17Q96LX7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC17Q96LX7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms