Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATP2A3Q93084 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATP2A3Q93084 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.52■□□□□ 0.55
ATP2A3Q93084 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ATP2A3Q93084 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
ATP2A3Q93084 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
ATP2A3Q93084 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.52■□□□□ 0.55
ATP2A3Q93084 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
ATP2A3Q93084 OR6D1P-203ENST00000641209 4860 ntBASIC18.51■□□□□ 0.55
ATP2A3Q93084 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A3Q93084 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A3Q93084 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ATP2A3Q93084 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A3Q93084 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A3Q93084 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A3Q93084 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A3Q93084 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A3Q93084 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.51■□□□□ 0.55
ATP2A3Q93084 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A3Q93084 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A3Q93084 AC018712.1-201ENST00000455767 687 ntBASIC18.51■□□□□ 0.55
ATP2A3Q93084 RNPS1P1-201ENST00000507437 918 ntBASIC18.51■□□□□ 0.55
ATP2A3Q93084 AC112698.1-201ENST00000510299 916 ntBASIC18.51■□□□□ 0.55
ATP2A3Q93084 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.51■□□□□ 0.55
ATP2A3Q93084 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.51■□□□□ 0.55
ATP2A3Q93084 AP001269.4-201ENST00000609611 512 ntBASIC18.51■□□□□ 0.55
ATP2A3Q93084 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.51■□□□□ 0.55
ATP2A3Q93084 AC148477.8-201ENST00000624298 468 ntBASIC18.51■□□□□ 0.55
ATP2A3Q93084 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.51■□□□□ 0.55
ATP2A3Q93084 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ATP2A3Q93084 AC093677.2-201ENST00000600169 1863 ntBASIC18.51■□□□□ 0.55
ATP2A3Q93084 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
ATP2A3Q93084 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.51■□□□□ 0.55
ATP2A3Q93084 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A3Q93084 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A3Q93084 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A3Q93084 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A3Q93084 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A3Q93084 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A3Q93084 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A3Q93084 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A3Q93084 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A3Q93084 AC138028.4-201ENST00000564984 1845 ntBASIC18.51■□□□□ 0.55
ATP2A3Q93084 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A3Q93084 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A3Q93084 GMCL1P1-201ENST00000463439 1581 ntBASIC18.51■□□□□ 0.55
ATP2A3Q93084 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.51■□□□□ 0.55
ATP2A3Q93084 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ATP2A3Q93084 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ATP2A3Q93084 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ATP2A3Q93084 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A3Q93084 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A3Q93084 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A3Q93084 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ATP2A3Q93084 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A3Q93084 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP2A3Q93084 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A3Q93084 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ATP2A3Q93084 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ATP2A3Q93084 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A3Q93084 RPS2P28-201ENST00000314255 741 ntBASIC18.5■□□□□ 0.55
ATP2A3Q93084 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A3Q93084 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
ATP2A3Q93084 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
ATP2A3Q93084 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP2A3Q93084 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP2A3Q93084 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.5■□□□□ 0.55
ATP2A3Q93084 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.5■□□□□ 0.55
ATP2A3Q93084 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A3Q93084 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A3Q93084 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ATP2A3Q93084 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP2A3Q93084 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.5■□□□□ 0.55
ATP2A3Q93084 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A3Q93084 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.49■□□□□ 0.55
ATP2A3Q93084 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A3Q93084 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A3Q93084 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.49■□□□□ 0.55
ATP2A3Q93084 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
ATP2A3Q93084 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.49■□□□□ 0.55
ATP2A3Q93084 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A3Q93084 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ATP2A3Q93084 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.49■□□□□ 0.55
ATP2A3Q93084 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.49■□□□□ 0.55
ATP2A3Q93084 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A3Q93084 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.49■□□□□ 0.55
ATP2A3Q93084 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.49■□□□□ 0.55
ATP2A3Q93084 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.49■□□□□ 0.55
ATP2A3Q93084 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.49■□□□□ 0.55
ATP2A3Q93084 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.49■□□□□ 0.55
ATP2A3Q93084 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.49■□□□□ 0.55
ATP2A3Q93084 AF228730.7-201ENST00000641842 219 ntBASIC18.49■□□□□ 0.55
ATP2A3Q93084 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A3Q93084 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A3Q93084 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.49■□□□□ 0.55
ATP2A3Q93084 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A3Q93084 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A3Q93084 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A3Q93084 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
ATP2A3Q93084 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms