Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.67■□□□□ 0.58
DDX1Q92499 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX1Q92499 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX1Q92499 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DDX1Q92499 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DDX1Q92499 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX1Q92499 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX1Q92499 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.67■□□□□ 0.58
DDX1Q92499 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.67■□□□□ 0.58
DDX1Q92499 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX1Q92499 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.67■□□□□ 0.58
DDX1Q92499 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
DDX1Q92499 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX1Q92499 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX1Q92499 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.66■□□□□ 0.58
DDX1Q92499 AC116353.5-201ENST00000638148 1699 ntBASIC18.66■□□□□ 0.58
DDX1Q92499 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX1Q92499 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX1Q92499 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX1Q92499 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX1Q92499 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX1Q92499 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.66■□□□□ 0.58
DDX1Q92499 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDX1Q92499 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.66■□□□□ 0.58
DDX1Q92499 VENTXP7-201ENST00000475503 772 ntBASIC18.66■□□□□ 0.58
DDX1Q92499 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.66■□□□□ 0.58
DDX1Q92499 BNIP3P18-201ENST00000593976 575 ntBASIC18.66■□□□□ 0.58
DDX1Q92499 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.66■□□□□ 0.58
DDX1Q92499 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
DDX1Q92499 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.66■□□□□ 0.58
DDX1Q92499 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.66■□□□□ 0.58
DDX1Q92499 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX1Q92499 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX1Q92499 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX1Q92499 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.66■□□□□ 0.58
DDX1Q92499 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.66■□□□□ 0.58
DDX1Q92499 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.66■□□□□ 0.58
DDX1Q92499 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX1Q92499 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.66■□□□□ 0.58
DDX1Q92499 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDX1Q92499 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.66■□□□□ 0.58
DDX1Q92499 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
DDX1Q92499 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX1Q92499 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX1Q92499 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX1Q92499 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX1Q92499 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
DDX1Q92499 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.65■□□□□ 0.58
DDX1Q92499 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
DDX1Q92499 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX1Q92499 AL353593.2-201ENST00000602529 1483 ntBASIC18.65■□□□□ 0.58
DDX1Q92499 TP73-AS1-210ENST00000637775 1455 ntBASIC18.65■□□□□ 0.58
DDX1Q92499 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DDX1Q92499 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DDX1Q92499 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
DDX1Q92499 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX1Q92499 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX1Q92499 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX1Q92499 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DDX1Q92499 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DDX1Q92499 AC103564.2-201ENST00000432853 1299 ntBASIC18.65■□□□□ 0.58
DDX1Q92499 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.65■□□□□ 0.58
DDX1Q92499 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
DDX1Q92499 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
DDX1Q92499 AC064862.7-201ENST00000604520 867 ntBASIC18.65■□□□□ 0.58
DDX1Q92499 AL732292.2-201ENST00000609649 430 ntBASIC18.65■□□□□ 0.58
DDX1Q92499 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
DDX1Q92499 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.65■□□□□ 0.58
DDX1Q92499 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX1Q92499 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX1Q92499 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX1Q92499 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
DDX1Q92499 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DDX1Q92499 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DDX1Q92499 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.64■□□□□ 0.58
DDX1Q92499 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
DDX1Q92499 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
DDX1Q92499 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.64■□□□□ 0.58
DDX1Q92499 NSUN5P1-202ENST00000421140 1535 ntBASIC18.64■□□□□ 0.58
DDX1Q92499 NSUN5P2-203ENST00000457352 1529 ntBASIC18.64■□□□□ 0.58
DDX1Q92499 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
DDX1Q92499 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
DDX1Q92499 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.64■□□□□ 0.57
DDX1Q92499 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX1Q92499 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.64■□□□□ 0.57
DDX1Q92499 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
DDX1Q92499 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX1Q92499 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX1Q92499 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX1Q92499 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
DDX1Q92499 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX1Q92499 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX1Q92499 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX1Q92499 MIR1233-2-201ENST00000408138 82 ntBASIC18.64■□□□□ 0.57
DDX1Q92499 MIR1233-1-201ENST00000408722 82 ntBASIC18.64■□□□□ 0.57
DDX1Q92499 AC092183.1-201ENST00000469884 875 ntBASIC18.64■□□□□ 0.57
DDX1Q92499 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.64■□□□□ 0.57
DDX1Q92499 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
DDX1Q92499 Z69720.1-201ENST00000601483 472 ntBASIC18.64■□□□□ 0.57
DDX1Q92499 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms