Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 PVRIG2P-201ENST00000435460 978 ntBASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 AC011558.1-201ENST00000623459 338 ntBASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RTN4IP1Q8WWV3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 AC117947.1-201ENST00000427448 529 ntBASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RTN4IP1Q8WWV3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTN4IP1Q8WWV3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RTN4IP1Q8WWV3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTN4IP1Q8WWV3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RTN4IP1Q8WWV3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RTN4IP1Q8WWV3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTN4IP1Q8WWV3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTN4IP1Q8WWV3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTN4IP1Q8WWV3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTN4IP1Q8WWV3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTN4IP1Q8WWV3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
RTN4IP1Q8WWV3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTN4IP1Q8WWV3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RTN4IP1Q8WWV3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.79□□□□□ -0.04
RTN4IP1Q8WWV3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTN4IP1Q8WWV3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTN4IP1Q8WWV3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RTN4IP1Q8WWV3 RASA4DP-201ENST00000460726 1199 ntBASIC14.79□□□□□ -0.04
RTN4IP1Q8WWV3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTN4IP1Q8WWV3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.79□□□□□ -0.04
RTN4IP1Q8WWV3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
RTN4IP1Q8WWV3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTN4IP1Q8WWV3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms