Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CKAP2Q8WWK9 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CKAP2Q8WWK9 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CKAP2Q8WWK9 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CKAP2Q8WWK9 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CKAP2Q8WWK9 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CKAP2Q8WWK9 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
CKAP2Q8WWK9 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CKAP2Q8WWK9 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CKAP2Q8WWK9 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CKAP2Q8WWK9 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CKAP2Q8WWK9 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.46■□□□□ 0.39
CKAP2Q8WWK9 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CKAP2Q8WWK9 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.46■□□□□ 0.39
CKAP2Q8WWK9 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CKAP2Q8WWK9 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CKAP2Q8WWK9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CKAP2Q8WWK9 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CKAP2Q8WWK9 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.46■□□□□ 0.38
CKAP2Q8WWK9 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CKAP2Q8WWK9 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.46■□□□□ 0.38
CKAP2Q8WWK9 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 AC093525.9-201ENST00000624961 1746 ntBASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 FAM197Y1-201ENST00000421178 764 ntBASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 AL139327.4-201ENST00000612362 153 ntBASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 BX276092.7-203ENST00000637198 1536 ntBASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 KRT8P9-201ENST00000558927 1449 ntBASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 LINC00554-201ENST00000564841 3011 ntBASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CKAP2Q8WWK9 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 AL023803.3-201ENST00000615559 522 ntBASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CKAP2Q8WWK9 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms