Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CNIH3Q8TBE1 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CNIH3Q8TBE1 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 DDX43P3-201ENST00000441064 443 ntBASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 MIR3180-4-201ENST00000582223 153 ntBASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.07■□□□□ 0.16
CNIH3Q8TBE1 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 AC007950.2-201ENST00000615045 2347 ntBASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 AC092053.1-201ENST00000605787 1936 ntBASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 RN7SL471P-201ENST00000580476 299 ntBASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 CR769767.2-201ENST00000622735 460 ntBASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 AC092068.3-201ENST00000587894 2016 ntBASIC16.06■□□□□ 0.16
CNIH3Q8TBE1 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
CNIH3Q8TBE1 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNIH3Q8TBE1 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNIH3Q8TBE1 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CNIH3Q8TBE1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.05■□□□□ 0.16
CNIH3Q8TBE1 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CNIH3Q8TBE1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNIH3Q8TBE1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNIH3Q8TBE1 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNIH3Q8TBE1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNIH3Q8TBE1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNIH3Q8TBE1 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNIH3Q8TBE1 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNIH3Q8TBE1 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.05■□□□□ 0.16
CNIH3Q8TBE1 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
CNIH3Q8TBE1 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNIH3Q8TBE1 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNIH3Q8TBE1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNIH3Q8TBE1 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNIH3Q8TBE1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CNIH3Q8TBE1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNIH3Q8TBE1 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNIH3Q8TBE1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.05■□□□□ 0.16
CNIH3Q8TBE1 ESRRAP1-201ENST00000400596 1257 ntBASIC16.05■□□□□ 0.16
CNIH3Q8TBE1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.05■□□□□ 0.16
CNIH3Q8TBE1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.05■□□□□ 0.16
CNIH3Q8TBE1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.05■□□□□ 0.16
CNIH3Q8TBE1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms