Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST2Q8NFU1 AC008764.6-201ENST00000595909 2069 ntBASIC18.88■□□□□ 0.61
BEST2Q8NFU1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST2Q8NFU1 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST2Q8NFU1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.88■□□□□ 0.61
BEST2Q8NFU1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BEST2Q8NFU1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
BEST2Q8NFU1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BEST2Q8NFU1 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BEST2Q8NFU1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BEST2Q8NFU1 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BEST2Q8NFU1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BEST2Q8NFU1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
BEST2Q8NFU1 AL590627.1-203ENST00000421194 1026 ntBASIC18.87■□□□□ 0.61
BEST2Q8NFU1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.87■□□□□ 0.61
BEST2Q8NFU1 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
BEST2Q8NFU1 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.87■□□□□ 0.61
BEST2Q8NFU1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.87■□□□□ 0.61
BEST2Q8NFU1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
BEST2Q8NFU1 AC009336.1-201ENST00000608941 1553 ntBASIC18.87■□□□□ 0.61
BEST2Q8NFU1 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
BEST2Q8NFU1 OR6D1P-202ENST00000641007 5290 ntBASIC18.87■□□□□ 0.61
BEST2Q8NFU1 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BEST2Q8NFU1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BEST2Q8NFU1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
BEST2Q8NFU1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BEST2Q8NFU1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BEST2Q8NFU1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BEST2Q8NFU1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BEST2Q8NFU1 AC148477.5-201ENST00000625164 1645 ntBASIC18.86■□□□□ 0.61
BEST2Q8NFU1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BEST2Q8NFU1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BEST2Q8NFU1 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.86■□□□□ 0.61
BEST2Q8NFU1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BEST2Q8NFU1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
BEST2Q8NFU1 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
BEST2Q8NFU1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.86■□□□□ 0.61
BEST2Q8NFU1 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.86■□□□□ 0.61
BEST2Q8NFU1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BEST2Q8NFU1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.86■□□□□ 0.61
BEST2Q8NFU1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.86■□□□□ 0.61
BEST2Q8NFU1 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.86■□□□□ 0.61
BEST2Q8NFU1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
BEST2Q8NFU1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.86■□□□□ 0.61
BEST2Q8NFU1 AC120114.3-201ENST00000611923 658 ntBASIC18.86■□□□□ 0.61
BEST2Q8NFU1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.86■□□□□ 0.61
BEST2Q8NFU1 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.86■□□□□ 0.61
BEST2Q8NFU1 AC107918.4-202ENST00000641623 219 ntBASIC18.86■□□□□ 0.61
BEST2Q8NFU1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
BEST2Q8NFU1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BEST2Q8NFU1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
BEST2Q8NFU1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BEST2Q8NFU1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BEST2Q8NFU1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BEST2Q8NFU1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BEST2Q8NFU1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BEST2Q8NFU1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
BEST2Q8NFU1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BEST2Q8NFU1 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.85■□□□□ 0.61
BEST2Q8NFU1 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
BEST2Q8NFU1 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BEST2Q8NFU1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BEST2Q8NFU1 IL9RP2-201ENST00000423948 1312 ntBASIC18.85■□□□□ 0.61
BEST2Q8NFU1 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.85■□□□□ 0.61
BEST2Q8NFU1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.85■□□□□ 0.61
BEST2Q8NFU1 LAGE3P1-201ENST00000425356 484 ntBASIC18.85■□□□□ 0.61
BEST2Q8NFU1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
BEST2Q8NFU1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.85■□□□□ 0.61
BEST2Q8NFU1 AL671883.3-201ENST00000603274 991 ntBASIC18.85■□□□□ 0.61
BEST2Q8NFU1 MIR7706-201ENST00000613747 67 ntBASIC18.85■□□□□ 0.61
BEST2Q8NFU1 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
BEST2Q8NFU1 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.85■□□□□ 0.61
BEST2Q8NFU1 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.85■□□□□ 0.61
BEST2Q8NFU1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.85■□□□□ 0.61
BEST2Q8NFU1 LINC00304-203ENST00000565008 1864 ntBASIC18.85■□□□□ 0.61
BEST2Q8NFU1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.85■□□□□ 0.61
BEST2Q8NFU1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BEST2Q8NFU1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BEST2Q8NFU1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BEST2Q8NFU1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
BEST2Q8NFU1 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
BEST2Q8NFU1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.85■□□□□ 0.61
BEST2Q8NFU1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST2Q8NFU1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
BEST2Q8NFU1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BEST2Q8NFU1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.84■□□□□ 0.61
BEST2Q8NFU1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST2Q8NFU1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST2Q8NFU1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
BEST2Q8NFU1 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.84■□□□□ 0.61
BEST2Q8NFU1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.84■□□□□ 0.61
BEST2Q8NFU1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST2Q8NFU1 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.84■□□□□ 0.61
BEST2Q8NFU1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
BEST2Q8NFU1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
BEST2Q8NFU1 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST2Q8NFU1 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST2Q8NFU1 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BEST2Q8NFU1 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.84■□□□□ 0.61
BEST2Q8NFU1 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms