Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PAF1Q8N7H5 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 NUS1P2-201ENST00000417358 873 ntBASIC18.06■□□□□ 0.48
PAF1Q8N7H5 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 AC096582.2-201ENST00000510860 516 ntBASIC18.06■□□□□ 0.48
PAF1Q8N7H5 CLEC4GP1-201ENST00000596555 870 ntBASIC18.06■□□□□ 0.48
PAF1Q8N7H5 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 FLJ13224-201ENST00000313737 1514 ntBASIC18.06■□□□□ 0.48
PAF1Q8N7H5 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.06■□□□□ 0.48
PAF1Q8N7H5 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 AC063926.3-201ENST00000624734 5658 ntBASIC18.06■□□□□ 0.48
PAF1Q8N7H5 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PAF1Q8N7H5 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PAF1Q8N7H5 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PAF1Q8N7H5 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.05■□□□□ 0.48
PAF1Q8N7H5 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PAF1Q8N7H5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PAF1Q8N7H5 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PAF1Q8N7H5 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PAF1Q8N7H5 NSUN5P1-202ENST00000421140 1535 ntBASIC18.05■□□□□ 0.48
PAF1Q8N7H5 NSUN5P2-203ENST00000457352 1529 ntBASIC18.05■□□□□ 0.48
PAF1Q8N7H5 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PAF1Q8N7H5 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PAF1Q8N7H5 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PAF1Q8N7H5 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
PAF1Q8N7H5 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PAF1Q8N7H5 AC246785.2-201ENST00000432512 513 ntBASIC18.05■□□□□ 0.48
PAF1Q8N7H5 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PAF1Q8N7H5 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
PAF1Q8N7H5 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.05■□□□□ 0.48
PAF1Q8N7H5 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.05■□□□□ 0.48
PAF1Q8N7H5 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.05■□□□□ 0.48
PAF1Q8N7H5 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PAF1Q8N7H5 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
PAF1Q8N7H5 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PAF1Q8N7H5 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.05■□□□□ 0.48
PAF1Q8N7H5 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PAF1Q8N7H5 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PAF1Q8N7H5 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PAF1Q8N7H5 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.05■□□□□ 0.48
PAF1Q8N7H5 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.05■□□□□ 0.48
PAF1Q8N7H5 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PAF1Q8N7H5 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PAF1Q8N7H5 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PAF1Q8N7H5 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PAF1Q8N7H5 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PAF1Q8N7H5 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PAF1Q8N7H5 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PAF1Q8N7H5 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PAF1Q8N7H5 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.04■□□□□ 0.48
PAF1Q8N7H5 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PAF1Q8N7H5 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PAF1Q8N7H5 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PAF1Q8N7H5 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.04■□□□□ 0.48
PAF1Q8N7H5 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PAF1Q8N7H5 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PAF1Q8N7H5 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PAF1Q8N7H5 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PAF1Q8N7H5 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PAF1Q8N7H5 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.04■□□□□ 0.48
PAF1Q8N7H5 DUTP2-201ENST00000519164 463 ntBASIC18.04■□□□□ 0.48
PAF1Q8N7H5 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PAF1Q8N7H5 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.04■□□□□ 0.48
PAF1Q8N7H5 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.04■□□□□ 0.48
PAF1Q8N7H5 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PAF1Q8N7H5 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PAF1Q8N7H5 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PAF1Q8N7H5 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PAF1Q8N7H5 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PAF1Q8N7H5 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PAF1Q8N7H5 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms