Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 AP002414.1-201ENST00000391405 1147 ntBASIC18.93■□□□□ 0.62
HERC6Q8IVU3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 HLA-J-203ENST00000494367 1087 ntBASIC18.93■□□□□ 0.62
HERC6Q8IVU3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 AC105339.1-204ENST00000636249 355 ntBASIC18.93■□□□□ 0.62
HERC6Q8IVU3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 AL031598.1-201ENST00000561511 1773 ntBASIC18.93■□□□□ 0.62
HERC6Q8IVU3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.92■□□□□ 0.62
HERC6Q8IVU3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HERC6Q8IVU3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HERC6Q8IVU3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HERC6Q8IVU3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HERC6Q8IVU3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HERC6Q8IVU3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
HERC6Q8IVU3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HERC6Q8IVU3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.92■□□□□ 0.62
HERC6Q8IVU3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.92■□□□□ 0.62
HERC6Q8IVU3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.92■□□□□ 0.62
HERC6Q8IVU3 AC025678.2-201ENST00000562061 970 ntBASIC18.92■□□□□ 0.62
HERC6Q8IVU3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HERC6Q8IVU3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.92■□□□□ 0.62
HERC6Q8IVU3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.92■□□□□ 0.62
HERC6Q8IVU3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.92■□□□□ 0.62
HERC6Q8IVU3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.92■□□□□ 0.62
HERC6Q8IVU3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HERC6Q8IVU3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HERC6Q8IVU3 AC093010.1-201ENST00000473625 1624 ntBASIC18.92■□□□□ 0.62
HERC6Q8IVU3 LETM1P2-201ENST00000597330 2178 ntBASIC18.92■□□□□ 0.62
HERC6Q8IVU3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HERC6Q8IVU3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.92■□□□□ 0.62
HERC6Q8IVU3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HERC6Q8IVU3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HERC6Q8IVU3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HERC6Q8IVU3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HERC6Q8IVU3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HERC6Q8IVU3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.91■□□□□ 0.62
HERC6Q8IVU3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HERC6Q8IVU3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.91■□□□□ 0.62
HERC6Q8IVU3 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.91■□□□□ 0.62
HERC6Q8IVU3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HERC6Q8IVU3 PAWRP1-201ENST00000451083 565 ntBASIC18.91■□□□□ 0.62
HERC6Q8IVU3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.91■□□□□ 0.62
HERC6Q8IVU3 DUTP2-201ENST00000519164 463 ntBASIC18.91■□□□□ 0.62
HERC6Q8IVU3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.91■□□□□ 0.62
HERC6Q8IVU3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.91■□□□□ 0.62
HERC6Q8IVU3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.91■□□□□ 0.62
HERC6Q8IVU3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.91■□□□□ 0.62
HERC6Q8IVU3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.91■□□□□ 0.62
HERC6Q8IVU3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HERC6Q8IVU3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HERC6Q8IVU3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.91■□□□□ 0.62
HERC6Q8IVU3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HERC6Q8IVU3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HERC6Q8IVU3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
HERC6Q8IVU3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HERC6Q8IVU3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms