Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 PRKY-204ENST00000533551 1019 ntBASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 AC005915.1-201ENST00000624912 2018 ntBASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 AC006058.4-201ENST00000624016 1670 ntBASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CROCCP3Q8IVE0 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CROCCP3Q8IVE0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC15.94■□□□□ 0.14
CROCCP3Q8IVE0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CROCCP3Q8IVE0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CROCCP3Q8IVE0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CROCCP3Q8IVE0 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CROCCP3Q8IVE0 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CROCCP3Q8IVE0 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CROCCP3Q8IVE0 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CROCCP3Q8IVE0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC15.94■□□□□ 0.14
CROCCP3Q8IVE0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.94■□□□□ 0.14
CROCCP3Q8IVE0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.94■□□□□ 0.14
CROCCP3Q8IVE0 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.94■□□□□ 0.14
CROCCP3Q8IVE0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CROCCP3Q8IVE0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC15.94■□□□□ 0.14
CROCCP3Q8IVE0 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.94■□□□□ 0.14
CROCCP3Q8IVE0 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.94■□□□□ 0.14
CROCCP3Q8IVE0 AL109659.2-201ENST00000606809 1674 ntBASIC15.94■□□□□ 0.14
CROCCP3Q8IVE0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.94■□□□□ 0.14
CROCCP3Q8IVE0 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CROCCP3Q8IVE0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.94■□□□□ 0.14
CROCCP3Q8IVE0 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CROCCP3Q8IVE0 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.94■□□□□ 0.14
CROCCP3Q8IVE0 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CROCCP3Q8IVE0 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CROCCP3Q8IVE0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.94■□□□□ 0.14
CROCCP3Q8IVE0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC15.94■□□□□ 0.14
CROCCP3Q8IVE0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CROCCP3Q8IVE0 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CROCCP3Q8IVE0 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 ZNRF2P3-201ENST00000424200 374 ntBASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 Z85996.1-201ENST00000494644 937 ntBASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CROCCP3Q8IVE0 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CROCCP3Q8IVE0 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms