Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.52■□□□□ 0.08
RTTNQ86VV8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RTTNQ86VV8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RTTNQ86VV8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.52■□□□□ 0.08
RTTNQ86VV8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
RTTNQ86VV8 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.52■□□□□ 0.08
RTTNQ86VV8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RTTNQ86VV8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.52■□□□□ 0.08
RTTNQ86VV8 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RTTNQ86VV8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RTTNQ86VV8 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RTTNQ86VV8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
RTTNQ86VV8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RTTNQ86VV8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
RTTNQ86VV8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RTTNQ86VV8 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RTTNQ86VV8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RTTNQ86VV8 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.52■□□□□ 0.07
RTTNQ86VV8 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
RTTNQ86VV8 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RTTNQ86VV8 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
RTTNQ86VV8 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.52■□□□□ 0.07
RTTNQ86VV8 MTCL1P1-201ENST00000446207 792 ntBASIC15.52■□□□□ 0.07
RTTNQ86VV8 AC079776.4-201ENST00000511039 504 ntBASIC15.52■□□□□ 0.07
RTTNQ86VV8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
RTTNQ86VV8 KRT8P26-201ENST00000534154 1276 ntBASIC15.52■□□□□ 0.07
RTTNQ86VV8 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.52■□□□□ 0.07
RTTNQ86VV8 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
RTTNQ86VV8 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
RTTNQ86VV8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
RTTNQ86VV8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RTTNQ86VV8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RTTNQ86VV8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RTTNQ86VV8 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
RTTNQ86VV8 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RTTNQ86VV8 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.52■□□□□ 0.07
RTTNQ86VV8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RTTNQ86VV8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RTTNQ86VV8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
RTTNQ86VV8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.51■□□□□ 0.07
RTTNQ86VV8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RTTNQ86VV8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RTTNQ86VV8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.51■□□□□ 0.07
RTTNQ86VV8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.51■□□□□ 0.07
RTTNQ86VV8 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
RTTNQ86VV8 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.51■□□□□ 0.07
RTTNQ86VV8 DUTP2-201ENST00000519164 463 ntBASIC15.51■□□□□ 0.07
RTTNQ86VV8 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.51■□□□□ 0.07
RTTNQ86VV8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.51■□□□□ 0.07
RTTNQ86VV8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RTTNQ86VV8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RTTNQ86VV8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.51■□□□□ 0.07
RTTNQ86VV8 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RTTNQ86VV8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.51■□□□□ 0.07
RTTNQ86VV8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RTTNQ86VV8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.51■□□□□ 0.07
RTTNQ86VV8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RTTNQ86VV8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RTTNQ86VV8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.51■□□□□ 0.07
RTTNQ86VV8 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RTTNQ86VV8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RTTNQ86VV8 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.51■□□□□ 0.07
RTTNQ86VV8 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RTTNQ86VV8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.51■□□□□ 0.07
RTTNQ86VV8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RTTNQ86VV8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.51■□□□□ 0.07
RTTNQ86VV8 AC106795.1-205ENST00000512851 1056 ntBASIC15.51■□□□□ 0.07
RTTNQ86VV8 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
RTTNQ86VV8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.51■□□□□ 0.07
RTTNQ86VV8 AP002414.4-201ENST00000589764 1148 ntBASIC15.51■□□□□ 0.07
RTTNQ86VV8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RTTNQ86VV8 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RTTNQ86VV8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RTTNQ86VV8 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RTTNQ86VV8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.51■□□□□ 0.07
RTTNQ86VV8 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RTTNQ86VV8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RTTNQ86VV8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RTTNQ86VV8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RTTNQ86VV8 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RTTNQ86VV8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RTTNQ86VV8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RTTNQ86VV8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RTTNQ86VV8 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RTTNQ86VV8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RTTNQ86VV8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.5■□□□□ 0.07
RTTNQ86VV8 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.5■□□□□ 0.07
RTTNQ86VV8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.5■□□□□ 0.07
RTTNQ86VV8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.5■□□□□ 0.07
RTTNQ86VV8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.5■□□□□ 0.07
RTTNQ86VV8 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
RTTNQ86VV8 KRT18P1-202ENST00000452408 1331 ntBASIC15.5■□□□□ 0.07
RTTNQ86VV8 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RTTNQ86VV8 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
RTTNQ86VV8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
RTTNQ86VV8 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RTTNQ86VV8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RTTNQ86VV8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RTTNQ86VV8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RTTNQ86VV8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms