Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 RHOQP3-201ENST00000437982 621 ntBASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 AL596442.2-201ENST00000610240 980 ntBASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 AC006116.8-202ENST00000587620 1550 ntBASIC14.9□□□□□ -0.02
RAI1Q7Z5J4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 AL133373.2-201ENST00000623187 2828 ntBASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 AP002414.1-201ENST00000391405 1147 ntBASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 RFPL4AP1-201ENST00000530883 850 ntBASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 NOC2LP2-201ENST00000407594 1944 ntBASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 LINC00304-203ENST00000565008 1864 ntBASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.89□□□□□ -0.03
RAI1Q7Z5J4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 CNN2P11-201ENST00000429351 262 ntBASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 KRT19P2-202ENST00000557173 1012 ntBASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 AC134043.2-201ENST00000624206 2238 ntBASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAI1Q7Z5J4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms