Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 AC009053.2-201ENST00000563701 2365 ntBASIC15.44■□□□□ 0.06
HIST2H3AQ71DI3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST2H3AQ71DI3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST2H3AQ71DI3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST2H3AQ71DI3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.44■□□□□ 0.06
HIST2H3AQ71DI3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST2H3AQ71DI3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST2H3AQ71DI3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HIST2H3AQ71DI3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HIST2H3AQ71DI3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HIST2H3AQ71DI3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST2H3AQ71DI3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HIST2H3AQ71DI3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST2H3AQ71DI3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
HIST2H3AQ71DI3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 AC108860.2-201ENST00000562760 2183 ntBASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 AC122714.2-201ENST00000502787 707 ntBASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.43■□□□□ 0.06
HIST2H3AQ71DI3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 LYSMD4-203ENST00000378904 2122 ntBASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 AC019129.2-201ENST00000609837 1235 ntBASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 AL139327.4-201ENST00000612362 153 ntBASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 TNRC18P3-201ENST00000441896 2691 ntBASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
HIST2H3AQ71DI3 CROCCP2-202ENST00000412962 2773 ntBASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIST2H3AQ71DI3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms