Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC149Q6ZUS6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC149Q6ZUS6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC149Q6ZUS6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC149Q6ZUS6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC149Q6ZUS6 MRPL20P1-201ENST00000400819 433 ntBASIC18.38■□□□□ 0.53
CCDC149Q6ZUS6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC149Q6ZUS6 CEND1P1-201ENST00000451006 455 ntBASIC18.38■□□□□ 0.53
CCDC149Q6ZUS6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
CCDC149Q6ZUS6 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC149Q6ZUS6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.38■□□□□ 0.53
CCDC149Q6ZUS6 AC010654.1-201ENST00000615722 808 ntBASIC18.38■□□□□ 0.53
CCDC149Q6ZUS6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC149Q6ZUS6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC149Q6ZUS6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC149Q6ZUS6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CCDC149Q6ZUS6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC149Q6ZUS6 REXO1L9P-201ENST00000604264 2108 ntBASIC18.38■□□□□ 0.53
CCDC149Q6ZUS6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC149Q6ZUS6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC149Q6ZUS6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC149Q6ZUS6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 AP002414.1-201ENST00000391405 1147 ntBASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.37■□□□□ 0.53
CCDC149Q6ZUS6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 AC092364.2-202ENST00000597012 1073 ntBASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 AL353135.1-201ENST00000606729 504 ntBASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC149Q6ZUS6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC149Q6ZUS6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms