Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 AC073592.5-201ENST00000624854 528 ntBASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COLCA1Q6ZS62 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
COLCA1Q6ZS62 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
COLCA1Q6ZS62 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
COLCA1Q6ZS62 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
COLCA1Q6ZS62 AP001094.4-201ENST00000579008 2176 ntBASIC15.08■□□□□ 0.01
COLCA1Q6ZS62 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
COLCA1Q6ZS62 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
COLCA1Q6ZS62 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.08■□□□□ 0
COLCA1Q6ZS62 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.08■□□□□ 0
COLCA1Q6ZS62 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.08■□□□□ 0
COLCA1Q6ZS62 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.08■□□□□ 0
COLCA1Q6ZS62 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
COLCA1Q6ZS62 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.08■□□□□ 0
COLCA1Q6ZS62 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
COLCA1Q6ZS62 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.08■□□□□ 0
COLCA1Q6ZS62 SLC25A1P3-201ENST00000395415 828 ntBASIC15.08■□□□□ 0
COLCA1Q6ZS62 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.08■□□□□ 0
COLCA1Q6ZS62 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.08■□□□□ 0
COLCA1Q6ZS62 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.08■□□□□ 0
COLCA1Q6ZS62 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.08■□□□□ 0
COLCA1Q6ZS62 STK19B-204ENST00000512515 211 ntBASIC15.08■□□□□ 0
COLCA1Q6ZS62 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.08■□□□□ 0
COLCA1Q6ZS62 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.08■□□□□ 0
COLCA1Q6ZS62 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
COLCA1Q6ZS62 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
COLCA1Q6ZS62 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
COLCA1Q6ZS62 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
COLCA1Q6ZS62 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.08■□□□□ 0
COLCA1Q6ZS62 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
COLCA1Q6ZS62 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COLCA1Q6ZS62 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.07■□□□□ 0
COLCA1Q6ZS62 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COLCA1Q6ZS62 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
COLCA1Q6ZS62 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
COLCA1Q6ZS62 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
COLCA1Q6ZS62 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COLCA1Q6ZS62 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.07■□□□□ 0
COLCA1Q6ZS62 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.07■□□□□ 0
COLCA1Q6ZS62 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.07■□□□□ 0
COLCA1Q6ZS62 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.07■□□□□ 0
COLCA1Q6ZS62 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COLCA1Q6ZS62 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.07■□□□□ 0
COLCA1Q6ZS62 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.07■□□□□ 0
COLCA1Q6ZS62 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
COLCA1Q6ZS62 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.07■□□□□ 0
COLCA1Q6ZS62 ABCD1P5-201ENST00000445663 754 ntBASIC15.07■□□□□ 0
COLCA1Q6ZS62 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
COLCA1Q6ZS62 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.07■□□□□ 0
COLCA1Q6ZS62 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.07■□□□□ 0
COLCA1Q6ZS62 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.07■□□□□ 0
COLCA1Q6ZS62 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.07■□□□□ 0
COLCA1Q6ZS62 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.07■□□□□ 0
COLCA1Q6ZS62 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
COLCA1Q6ZS62 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.07■□□□□ 0
COLCA1Q6ZS62 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.07■□□□□ 0
COLCA1Q6ZS62 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COLCA1Q6ZS62 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms