Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC11.15□□□□□ -0.62
LINC00575Q6W349 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00575Q6W349 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
LINC00575Q6W349 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00575Q6W349 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00575Q6W349 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
LINC00575Q6W349 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00575Q6W349 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
LINC00575Q6W349 KRT18P23-201ENST00000435622 1283 ntBASIC11.15□□□□□ -0.62
LINC00575Q6W349 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC00575Q6W349 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC11.15□□□□□ -0.62
LINC00575Q6W349 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00575Q6W349 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC00575Q6W349 AC026185.1-201ENST00000445748 174 ntBASIC11.15□□□□□ -0.62
LINC00575Q6W349 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC00575Q6W349 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC00575Q6W349 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC00575Q6W349 RARRES2P10-201ENST00000564312 460 ntBASIC11.15□□□□□ -0.62
LINC00575Q6W349 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC00575Q6W349 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00575Q6W349 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
LINC00575Q6W349 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC11.15□□□□□ -0.62
LINC00575Q6W349 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC00575Q6W349 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC00575Q6W349 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC00575Q6W349 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00575Q6W349 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
LINC00575Q6W349 AC007950.2-201ENST00000615045 2347 ntBASIC11.15□□□□□ -0.62
LINC00575Q6W349 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00575Q6W349 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00575Q6W349 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00575Q6W349 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00575Q6W349 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC11.15□□□□□ -0.62
LINC00575Q6W349 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00575Q6W349 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC11.15□□□□□ -0.62
LINC00575Q6W349 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC11.15□□□□□ -0.63
LINC00575Q6W349 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC00575Q6W349 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC00575Q6W349 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
LINC00575Q6W349 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC11.15□□□□□ -0.63
LINC00575Q6W349 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC11.15□□□□□ -0.63
LINC00575Q6W349 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.63
LINC00575Q6W349 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC11.15□□□□□ -0.63
LINC00575Q6W349 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
LINC00575Q6W349 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00575Q6W349 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC00575Q6W349 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00575Q6W349 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00575Q6W349 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
LINC00575Q6W349 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00575Q6W349 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00575Q6W349 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00575Q6W349 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC11.14□□□□□ -0.63
LINC00575Q6W349 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
LINC00575Q6W349 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
LINC00575Q6W349 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00575Q6W349 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00575Q6W349 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00575Q6W349 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00575Q6W349 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00575Q6W349 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC00575Q6W349 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00575Q6W349 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
LINC00575Q6W349 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00575Q6W349 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
LINC00575Q6W349 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC00575Q6W349 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
LINC00575Q6W349 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00575Q6W349 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00575Q6W349 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00575Q6W349 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00575Q6W349 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC00575Q6W349 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00575Q6W349 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC11.14□□□□□ -0.63
LINC00575Q6W349 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC00575Q6W349 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC11.14□□□□□ -0.63
LINC00575Q6W349 KSR1P1-201ENST00000446298 240 ntBASIC11.14□□□□□ -0.63
LINC00575Q6W349 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC00575Q6W349 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC00575Q6W349 AC008040.2-201ENST00000461049 708 ntBASIC11.14□□□□□ -0.63
LINC00575Q6W349 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
LINC00575Q6W349 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC11.14□□□□□ -0.63
LINC00575Q6W349 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
LINC00575Q6W349 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00575Q6W349 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC11.14□□□□□ -0.63
LINC00575Q6W349 AC026271.3-201ENST00000571884 352 ntBASIC11.14□□□□□ -0.63
LINC00575Q6W349 MTDHP1-201ENST00000605323 784 ntBASIC11.14□□□□□ -0.63
LINC00575Q6W349 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC11.14□□□□□ -0.63
LINC00575Q6W349 AC083880.1-201ENST00000608266 535 ntBASIC11.14□□□□□ -0.63
LINC00575Q6W349 AC130371.2-201ENST00000619443 611 ntBASIC11.14□□□□□ -0.63
LINC00575Q6W349 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC11.14□□□□□ -0.63
LINC00575Q6W349 ABBA01031674.1-201ENST00000635145 728 ntBASIC11.14□□□□□ -0.63
LINC00575Q6W349 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC00575Q6W349 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00575Q6W349 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC00575Q6W349 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC00575Q6W349 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00575Q6W349 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00575Q6W349 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC00575Q6W349 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms