Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 AC092580.3-201ENST00000430932 139 ntBASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 AC241585.1-201ENST00000433527 519 ntBASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 AC004890.2-204ENST00000481968 304 ntBASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PTCRAQ6ISU1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTCRAQ6ISU1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.93■□□□□ 0.46
PTCRAQ6ISU1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCRAQ6ISU1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.93■□□□□ 0.46
PTCRAQ6ISU1 AC100803.2-201ENST00000562459 1963 ntBASIC17.93■□□□□ 0.46
PTCRAQ6ISU1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCRAQ6ISU1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCRAQ6ISU1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCRAQ6ISU1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTCRAQ6ISU1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.93■□□□□ 0.46
PTCRAQ6ISU1 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCRAQ6ISU1 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCRAQ6ISU1 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PTCRAQ6ISU1 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCRAQ6ISU1 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.93■□□□□ 0.46
PTCRAQ6ISU1 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.93■□□□□ 0.46
PTCRAQ6ISU1 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.93■□□□□ 0.46
PTCRAQ6ISU1 KRT8P23-201ENST00000560090 1207 ntBASIC17.93■□□□□ 0.46
PTCRAQ6ISU1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTCRAQ6ISU1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCRAQ6ISU1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PTCRAQ6ISU1 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTCRAQ6ISU1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.93■□□□□ 0.46
PTCRAQ6ISU1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PTCRAQ6ISU1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTCRAQ6ISU1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTCRAQ6ISU1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.93■□□□□ 0.46
PTCRAQ6ISU1 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.93■□□□□ 0.46
PTCRAQ6ISU1 BX276092.7-203ENST00000637198 1536 ntBASIC17.93■□□□□ 0.46
PTCRAQ6ISU1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 U91328.1-201ENST00000437528 223 ntBASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 SLC25A6P2-201ENST00000497974 877 ntBASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 AL161645.1-201ENST00000622716 1255 ntBASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.92■□□□□ 0.46
PTCRAQ6ISU1 PHGDH-209ENST00000641074 1780 ntBASIC17.91■□□□□ 0.46
PTCRAQ6ISU1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.91■□□□□ 0.46
PTCRAQ6ISU1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTCRAQ6ISU1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTCRAQ6ISU1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PTCRAQ6ISU1 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTCRAQ6ISU1 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PTCRAQ6ISU1 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.91■□□□□ 0.46
PTCRAQ6ISU1 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTCRAQ6ISU1 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.91■□□□□ 0.46
PTCRAQ6ISU1 MRPS18AP1-201ENST00000414458 589 ntBASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms