Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
PPP4R3AQ6IN85 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.95■□□□□ 0.78
PPP4R3AQ6IN85 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.95■□□□□ 0.78
PPP4R3AQ6IN85 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
PPP4R3AQ6IN85 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PPP4R3AQ6IN85 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.95■□□□□ 0.78
PPP4R3AQ6IN85 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.95■□□□□ 0.78
PPP4R3AQ6IN85 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PPP4R3AQ6IN85 MYCLP1-201ENST00000372451 1075 ntBASIC19.95■□□□□ 0.78
PPP4R3AQ6IN85 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PPP4R3AQ6IN85 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.95■□□□□ 0.78
PPP4R3AQ6IN85 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.95■□□□□ 0.78
PPP4R3AQ6IN85 AC106795.1-205ENST00000512851 1056 ntBASIC19.95■□□□□ 0.78
PPP4R3AQ6IN85 IGHV3-52-201ENST00000519770 353 ntBASIC19.95■□□□□ 0.78
PPP4R3AQ6IN85 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.95■□□□□ 0.78
PPP4R3AQ6IN85 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PPP4R3AQ6IN85 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PPP4R3AQ6IN85 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PPP4R3AQ6IN85 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
PPP4R3AQ6IN85 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PPP4R3AQ6IN85 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
PPP4R3AQ6IN85 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PPP4R3AQ6IN85 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.95■□□□□ 0.78
PPP4R3AQ6IN85 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PPP4R3AQ6IN85 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.95■□□□□ 0.78
PPP4R3AQ6IN85 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PPP4R3AQ6IN85 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
PPP4R3AQ6IN85 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.94■□□□□ 0.78
PPP4R3AQ6IN85 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
PPP4R3AQ6IN85 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PPP4R3AQ6IN85 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PPP4R3AQ6IN85 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PPP4R3AQ6IN85 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PPP4R3AQ6IN85 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PPP4R3AQ6IN85 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PPP4R3AQ6IN85 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PPP4R3AQ6IN85 UNC93B7-201ENST00000509439 705 ntBASIC19.94■□□□□ 0.78
PPP4R3AQ6IN85 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.94■□□□□ 0.78
PPP4R3AQ6IN85 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PPP4R3AQ6IN85 AC111152.3-201ENST00000569699 673 ntBASIC19.94■□□□□ 0.78
PPP4R3AQ6IN85 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.94■□□□□ 0.78
PPP4R3AQ6IN85 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.94■□□□□ 0.78
PPP4R3AQ6IN85 REXO1L6P-202ENST00000619970 1078 ntBASIC19.94■□□□□ 0.78
PPP4R3AQ6IN85 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PPP4R3AQ6IN85 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
PPP4R3AQ6IN85 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PPP4R3AQ6IN85 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PPP4R3AQ6IN85 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PPP4R3AQ6IN85 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
PPP4R3AQ6IN85 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
PPP4R3AQ6IN85 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 AP005117.1-201ENST00000584346 1413 ntBASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 KRT126P-201ENST00000549467 1181 ntBASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 STK25P1-201ENST00000585406 838 ntBASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 IFNL4P1-201ENST00000607083 540 ntBASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 AP001269.4-201ENST00000609611 512 ntBASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 LINC00896-202ENST00000609602 2128 ntBASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PPP4R3AQ6IN85 AC132938.5-201ENST00000624980 1813 ntBASIC19.92■□□□□ 0.78
PPP4R3AQ6IN85 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PPP4R3AQ6IN85 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PPP4R3AQ6IN85 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PPP4R3AQ6IN85 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PPP4R3AQ6IN85 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.92■□□□□ 0.78
PPP4R3AQ6IN85 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PPP4R3AQ6IN85 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.92■□□□□ 0.78
PPP4R3AQ6IN85 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms