Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.58■□□□□ 0.24
LPCAT4Q643R3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.58■□□□□ 0.24
LPCAT4Q643R3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
LPCAT4Q643R3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
LPCAT4Q643R3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
LPCAT4Q643R3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LPCAT4Q643R3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LPCAT4Q643R3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LPCAT4Q643R3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.58■□□□□ 0.24
LPCAT4Q643R3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LPCAT4Q643R3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LPCAT4Q643R3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LPCAT4Q643R3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.58■□□□□ 0.24
LPCAT4Q643R3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LPCAT4Q643R3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LPCAT4Q643R3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 AC022898.2-201ENST00000616822 1312 ntBASIC16.57■□□□□ 0.24
LPCAT4Q643R3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.57■□□□□ 0.24
LPCAT4Q643R3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 AC144831.1-201ENST00000573312 2656 ntBASIC16.57■□□□□ 0.24
LPCAT4Q643R3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT4Q643R3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LPCAT4Q643R3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LPCAT4Q643R3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms