Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 AC253536.4-201ENST00000440539 267 ntBASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 AL355994.2-201ENST00000447882 704 ntBASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 AC008735.3-201ENST00000596646 500 ntBASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 AL645728.2-201ENST00000641974 660 ntBASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 SDHAP2-201ENST00000455183 2001 ntBASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.86■□□□□ 0.61
PRPF38BQ5VTL8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 TUBB1P2-201ENST00000422712 1306 ntBASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 TUBB1P1-201ENST00000503144 1300 ntBASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 AC093677.2-201ENST00000600169 1863 ntBASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PRPF38BQ5VTL8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 LDHBP1-201ENST00000455730 1119 ntBASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 AC009407.1-201ENST00000568958 598 ntBASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 MIR3615-201ENST00000581999 87 ntBASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRPF38BQ5VTL8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
PRPF38BQ5VTL8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PRPF38BQ5VTL8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PRPF38BQ5VTL8 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC18.83■□□□□ 0.61
PRPF38BQ5VTL8 AC097637.2-201ENST00000624096 1997 ntBASIC18.83■□□□□ 0.61
PRPF38BQ5VTL8 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRPF38BQ5VTL8 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.83■□□□□ 0.6
PRPF38BQ5VTL8 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRPF38BQ5VTL8 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRPF38BQ5VTL8 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms