Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VARS2Q5ST30 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.55■□□□□ 0.56
VARS2Q5ST30 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.55■□□□□ 0.56
VARS2Q5ST30 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.54■□□□□ 0.56
VARS2Q5ST30 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.54■□□□□ 0.56
VARS2Q5ST30 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.54■□□□□ 0.56
VARS2Q5ST30 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VARS2Q5ST30 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VARS2Q5ST30 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VARS2Q5ST30 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
VARS2Q5ST30 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
VARS2Q5ST30 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.54■□□□□ 0.56
VARS2Q5ST30 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VARS2Q5ST30 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VARS2Q5ST30 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VARS2Q5ST30 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
VARS2Q5ST30 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VARS2Q5ST30 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.54■□□□□ 0.56
VARS2Q5ST30 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.54■□□□□ 0.56
VARS2Q5ST30 LINC00982-205ENST00000420957 435 ntBASIC18.54■□□□□ 0.56
VARS2Q5ST30 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VARS2Q5ST30 AC108073.2-201ENST00000464002 357 ntBASIC18.54■□□□□ 0.56
VARS2Q5ST30 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VARS2Q5ST30 IGHV3-65-201ENST00000523210 341 ntBASIC18.54■□□□□ 0.56
VARS2Q5ST30 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.54■□□□□ 0.56
VARS2Q5ST30 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.54■□□□□ 0.56
VARS2Q5ST30 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.54■□□□□ 0.56
VARS2Q5ST30 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.54■□□□□ 0.56
VARS2Q5ST30 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.54■□□□□ 0.56
VARS2Q5ST30 AC008667.4-201ENST00000607370 168 ntBASIC18.54■□□□□ 0.56
VARS2Q5ST30 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.54■□□□□ 0.56
VARS2Q5ST30 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.54■□□□□ 0.56
VARS2Q5ST30 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.54■□□□□ 0.56
VARS2Q5ST30 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
VARS2Q5ST30 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VARS2Q5ST30 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VARS2Q5ST30 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VARS2Q5ST30 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VARS2Q5ST30 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VARS2Q5ST30 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VARS2Q5ST30 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VARS2Q5ST30 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VARS2Q5ST30 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
VARS2Q5ST30 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VARS2Q5ST30 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VARS2Q5ST30 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VARS2Q5ST30 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
VARS2Q5ST30 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.53■□□□□ 0.56
VARS2Q5ST30 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VARS2Q5ST30 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.53■□□□□ 0.56
VARS2Q5ST30 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VARS2Q5ST30 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VARS2Q5ST30 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.53■□□□□ 0.56
VARS2Q5ST30 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.53■□□□□ 0.56
VARS2Q5ST30 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.53■□□□□ 0.56
VARS2Q5ST30 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VARS2Q5ST30 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VARS2Q5ST30 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
VARS2Q5ST30 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
VARS2Q5ST30 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.53■□□□□ 0.56
VARS2Q5ST30 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.53■□□□□ 0.56
VARS2Q5ST30 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
VARS2Q5ST30 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VARS2Q5ST30 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.53■□□□□ 0.56
VARS2Q5ST30 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VARS2Q5ST30 AL353135.1-201ENST00000606729 504 ntBASIC18.53■□□□□ 0.56
VARS2Q5ST30 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.53■□□□□ 0.56
VARS2Q5ST30 AL805961.1-202ENST00000641562 540 ntBASIC18.53■□□□□ 0.56
VARS2Q5ST30 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VARS2Q5ST30 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
VARS2Q5ST30 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VARS2Q5ST30 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VARS2Q5ST30 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VARS2Q5ST30 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VARS2Q5ST30 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VARS2Q5ST30 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
VARS2Q5ST30 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VARS2Q5ST30 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VARS2Q5ST30 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.52■□□□□ 0.56
VARS2Q5ST30 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VARS2Q5ST30 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VARS2Q5ST30 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.52■□□□□ 0.56
VARS2Q5ST30 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
VARS2Q5ST30 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VARS2Q5ST30 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.52■□□□□ 0.56
VARS2Q5ST30 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
VARS2Q5ST30 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.52■□□□□ 0.56
VARS2Q5ST30 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.52■□□□□ 0.56
VARS2Q5ST30 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VARS2Q5ST30 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
VARS2Q5ST30 YBX2P1-201ENST00000394192 760 ntBASIC18.52■□□□□ 0.56
VARS2Q5ST30 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.52■□□□□ 0.56
VARS2Q5ST30 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
VARS2Q5ST30 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VARS2Q5ST30 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.52■□□□□ 0.56
VARS2Q5ST30 KRT18P2-201ENST00000447938 1258 ntBASIC18.52■□□□□ 0.56
VARS2Q5ST30 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.52■□□□□ 0.56
VARS2Q5ST30 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.52■□□□□ 0.56
VARS2Q5ST30 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.52■□□□□ 0.56
VARS2Q5ST30 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms