Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CBWD3Q5JTY5 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CBWD3Q5JTY5 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CBWD3Q5JTY5 AC132938.5-201ENST00000624980 1813 ntBASIC18.95■□□□□ 0.62
CBWD3Q5JTY5 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CBWD3Q5JTY5 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.95■□□□□ 0.62
CBWD3Q5JTY5 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CBWD3Q5JTY5 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CBWD3Q5JTY5 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CBWD3Q5JTY5 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.95■□□□□ 0.62
CBWD3Q5JTY5 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 MYCLP1-201ENST00000372451 1075 ntBASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CBWD3Q5JTY5 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 AC016396.2-201ENST00000562575 1417 ntBASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 AC046185.3-201ENST00000623228 1824 ntBASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBWD3Q5JTY5 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.92■□□□□ 0.62
CBWD3Q5JTY5 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
CBWD3Q5JTY5 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.92■□□□□ 0.62
CBWD3Q5JTY5 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CBWD3Q5JTY5 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CBWD3Q5JTY5 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.92■□□□□ 0.62
CBWD3Q5JTY5 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CBWD3Q5JTY5 AC116353.5-201ENST00000638148 1699 ntBASIC18.92■□□□□ 0.62
CBWD3Q5JTY5 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CBWD3Q5JTY5 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CBWD3Q5JTY5 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CBWD3Q5JTY5 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CBWD3Q5JTY5 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CBWD3Q5JTY5 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CBWD3Q5JTY5 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CBWD3Q5JTY5 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms