Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CHRFAM7AQ494W8 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHRFAM7AQ494W8 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHRFAM7AQ494W8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.41■□□□□ 0.06
CHRFAM7AQ494W8 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHRFAM7AQ494W8 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CHRFAM7AQ494W8 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
CHRFAM7AQ494W8 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
CHRFAM7AQ494W8 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHRFAM7AQ494W8 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 TSPY22P-201ENST00000427496 604 ntBASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 AL645608.8-201ENST00000606034 2086 ntBASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 AC009053.2-201ENST00000563701 2365 ntBASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHRFAM7AQ494W8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 KRT18P31-201ENST00000506277 1292 ntBASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 FOSL1P1-201ENST00000511041 816 ntBASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 AC106795.1-205ENST00000512851 1056 ntBASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 AC012615.1-201ENST00000565797 1299 ntBASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
CHRFAM7AQ494W8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.38■□□□□ 0.05
CHRFAM7AQ494W8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms