Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 COX20P2-201ENST00000452636 358 ntBASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 AC122714.2-201ENST00000502787 707 ntBASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 AL078644.1-201ENST00000609881 752 ntBASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.73■□□□□ 0.59
CTC1Q2NKJ3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTC1Q2NKJ3 ANO7L1-203ENST00000602586 1720 ntBASIC18.72■□□□□ 0.59
CTC1Q2NKJ3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CTC1Q2NKJ3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CTC1Q2NKJ3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTC1Q2NKJ3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CTC1Q2NKJ3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTC1Q2NKJ3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTC1Q2NKJ3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTC1Q2NKJ3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CTC1Q2NKJ3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTC1Q2NKJ3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.72■□□□□ 0.59
CTC1Q2NKJ3 CEND1P1-201ENST00000451006 455 ntBASIC18.72■□□□□ 0.59
CTC1Q2NKJ3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.72■□□□□ 0.59
CTC1Q2NKJ3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.72■□□□□ 0.59
CTC1Q2NKJ3 AC018845.2-201ENST00000568326 409 ntBASIC18.72■□□□□ 0.59
CTC1Q2NKJ3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CTC1Q2NKJ3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.72■□□□□ 0.59
CTC1Q2NKJ3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.72■□□□□ 0.59
CTC1Q2NKJ3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.72■□□□□ 0.59
CTC1Q2NKJ3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.72■□□□□ 0.59
CTC1Q2NKJ3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.72■□□□□ 0.59
CTC1Q2NKJ3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTC1Q2NKJ3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.72■□□□□ 0.59
CTC1Q2NKJ3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTC1Q2NKJ3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTC1Q2NKJ3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTC1Q2NKJ3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CTC1Q2NKJ3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CTC1Q2NKJ3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 AC096633.1-201ENST00000422446 749 ntBASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 PRSS29P-201ENST00000440800 595 ntBASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTC1Q2NKJ3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CTC1Q2NKJ3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTC1Q2NKJ3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.7■□□□□ 0.58
CTC1Q2NKJ3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CTC1Q2NKJ3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTC1Q2NKJ3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.7■□□□□ 0.58
CTC1Q2NKJ3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CTC1Q2NKJ3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.7■□□□□ 0.58
CTC1Q2NKJ3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms