Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBXN1Q04323 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBXN1Q04323 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBXN1Q04323 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBXN1Q04323 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.24■□□□□ 0.67
UBXN1Q04323 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBXN1Q04323 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBXN1Q04323 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBXN1Q04323 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBXN1Q04323 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBXN1Q04323 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBXN1Q04323 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBXN1Q04323 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.24■□□□□ 0.67
UBXN1Q04323 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBXN1Q04323 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBXN1Q04323 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.24■□□□□ 0.67
UBXN1Q04323 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBXN1Q04323 YBX1P2-201ENST00000489612 999 ntBASIC19.24■□□□□ 0.67
UBXN1Q04323 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.24■□□□□ 0.67
UBXN1Q04323 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBXN1Q04323 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.24■□□□□ 0.67
UBXN1Q04323 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBXN1Q04323 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.24■□□□□ 0.67
UBXN1Q04323 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.24■□□□□ 0.67
UBXN1Q04323 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
UBXN1Q04323 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.24■□□□□ 0.67
UBXN1Q04323 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBXN1Q04323 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBXN1Q04323 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBXN1Q04323 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBXN1Q04323 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.24■□□□□ 0.67
UBXN1Q04323 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.24■□□□□ 0.67
UBXN1Q04323 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
UBXN1Q04323 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
UBXN1Q04323 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBXN1Q04323 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.24■□□□□ 0.67
UBXN1Q04323 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBXN1Q04323 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
UBXN1Q04323 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBXN1Q04323 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.23■□□□□ 0.67
UBXN1Q04323 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
UBXN1Q04323 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBXN1Q04323 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
UBXN1Q04323 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBXN1Q04323 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBXN1Q04323 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.23■□□□□ 0.67
UBXN1Q04323 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBXN1Q04323 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.23■□□□□ 0.67
UBXN1Q04323 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBXN1Q04323 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBXN1Q04323 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
UBXN1Q04323 MIR662-201ENST00000384847 95 ntBASIC19.23■□□□□ 0.67
UBXN1Q04323 BX664615.1-201ENST00000443558 458 ntBASIC19.23■□□□□ 0.67
UBXN1Q04323 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.23■□□□□ 0.67
UBXN1Q04323 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
UBXN1Q04323 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.23■□□□□ 0.67
UBXN1Q04323 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.23■□□□□ 0.67
UBXN1Q04323 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBXN1Q04323 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.23■□□□□ 0.67
UBXN1Q04323 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
UBXN1Q04323 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.23■□□□□ 0.67
UBXN1Q04323 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
UBXN1Q04323 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.23■□□□□ 0.67
UBXN1Q04323 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.23■□□□□ 0.67
UBXN1Q04323 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBXN1Q04323 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBXN1Q04323 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
UBXN1Q04323 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.23■□□□□ 0.67
UBXN1Q04323 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBXN1Q04323 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBXN1Q04323 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.23■□□□□ 0.67
UBXN1Q04323 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBXN1Q04323 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.22■□□□□ 0.67
UBXN1Q04323 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBXN1Q04323 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBXN1Q04323 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBXN1Q04323 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBXN1Q04323 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBXN1Q04323 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBXN1Q04323 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.22■□□□□ 0.67
UBXN1Q04323 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
UBXN1Q04323 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBXN1Q04323 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBXN1Q04323 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBXN1Q04323 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.22■□□□□ 0.67
UBXN1Q04323 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
UBXN1Q04323 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.22■□□□□ 0.67
UBXN1Q04323 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
UBXN1Q04323 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.22■□□□□ 0.67
UBXN1Q04323 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.22■□□□□ 0.67
UBXN1Q04323 GPR32P1-201ENST00000601788 811 ntBASIC19.22■□□□□ 0.67
UBXN1Q04323 AL139327.4-201ENST00000612362 153 ntBASIC19.22■□□□□ 0.67
UBXN1Q04323 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.22■□□□□ 0.67
UBXN1Q04323 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBXN1Q04323 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.22■□□□□ 0.67
UBXN1Q04323 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
UBXN1Q04323 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBXN1Q04323 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBXN1Q04323 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBXN1Q04323 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms