Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHA4P54764 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
EPHA4P54764 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHA4P54764 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHA4P54764 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EPHA4P54764 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHA4P54764 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHA4P54764 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EPHA4P54764 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EPHA4P54764 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.88■□□□□ 0.29
EPHA4P54764 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.88■□□□□ 0.29
EPHA4P54764 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.88■□□□□ 0.29
EPHA4P54764 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.88■□□□□ 0.29
EPHA4P54764 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
EPHA4P54764 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.88■□□□□ 0.29
EPHA4P54764 AC140113.2-201ENST00000604370 208 ntBASIC16.88■□□□□ 0.29
EPHA4P54764 AL139424.1-201ENST00000607572 797 ntBASIC16.88■□□□□ 0.29
EPHA4P54764 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHA4P54764 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHA4P54764 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
EPHA4P54764 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHA4P54764 PCDHB18P-201ENST00000524813 2368 ntBASIC16.88■□□□□ 0.29
EPHA4P54764 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.88■□□□□ 0.29
EPHA4P54764 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHA4P54764 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHA4P54764 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.88■□□□□ 0.29
EPHA4P54764 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHA4P54764 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA4P54764 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA4P54764 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA4P54764 AC009113.1-201ENST00000570267 2443 ntBASIC16.87■□□□□ 0.29
EPHA4P54764 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.87■□□□□ 0.29
EPHA4P54764 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
EPHA4P54764 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA4P54764 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA4P54764 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.87■□□□□ 0.29
EPHA4P54764 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA4P54764 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA4P54764 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
EPHA4P54764 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA4P54764 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.87■□□□□ 0.29
EPHA4P54764 AC009947.1-201ENST00000444350 727 ntBASIC16.87■□□□□ 0.29
EPHA4P54764 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA4P54764 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.87■□□□□ 0.29
EPHA4P54764 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
EPHA4P54764 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.87■□□□□ 0.29
EPHA4P54764 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.87■□□□□ 0.29
EPHA4P54764 GPALPP1-207ENST00000611650 899 ntBASIC16.87■□□□□ 0.29
EPHA4P54764 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA4P54764 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.87■□□□□ 0.29
EPHA4P54764 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA4P54764 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA4P54764 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA4P54764 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA4P54764 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA4P54764 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
EPHA4P54764 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
EPHA4P54764 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA4P54764 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.87■□□□□ 0.29
EPHA4P54764 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
EPHA4P54764 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA4P54764 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA4P54764 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHA4P54764 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
EPHA4P54764 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.86■□□□□ 0.29
EPHA4P54764 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.86■□□□□ 0.29
EPHA4P54764 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EPHA4P54764 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.86■□□□□ 0.29
EPHA4P54764 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHA4P54764 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHA4P54764 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.86■□□□□ 0.29
EPHA4P54764 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
EPHA4P54764 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHA4P54764 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHA4P54764 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.86■□□□□ 0.29
EPHA4P54764 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
EPHA4P54764 KRT18P13-201ENST00000400056 1290 ntBASIC16.86■□□□□ 0.29
EPHA4P54764 MIR940-201ENST00000401276 94 ntBASIC16.86■□□□□ 0.29
EPHA4P54764 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.86■□□□□ 0.29
EPHA4P54764 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EPHA4P54764 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
EPHA4P54764 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.86■□□□□ 0.29
EPHA4P54764 AC006538.3-201ENST00000612495 578 ntBASIC16.86■□□□□ 0.29
EPHA4P54764 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHA4P54764 AC135050.7-201ENST00000624508 2218 ntBASIC16.86■□□□□ 0.29
EPHA4P54764 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EPHA4P54764 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.86■□□□□ 0.29
EPHA4P54764 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
EPHA4P54764 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EPHA4P54764 BICD1-207ENST00000551848 1962 ntBASIC16.86■□□□□ 0.29
EPHA4P54764 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
EPHA4P54764 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA4P54764 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA4P54764 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA4P54764 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA4P54764 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
EPHA4P54764 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.85■□□□□ 0.29
EPHA4P54764 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA4P54764 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA4P54764 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms