Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 AC099336.1-202ENST00000602961 463 ntBASIC21.42■■□□□ 1.02
PDE1AP54750 AC046185.3-201ENST00000623228 1824 ntBASIC21.42■■□□□ 1.02
PDE1AP54750 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
PDE1AP54750 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDE1AP54750 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDE1AP54750 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDE1AP54750 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC21.42■■□□□ 1.02
PDE1AP54750 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDE1AP54750 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC21.41■■□□□ 1.02
PDE1AP54750 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PDE1AP54750 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC21.41■■□□□ 1.02
PDE1AP54750 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
PDE1AP54750 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDE1AP54750 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDE1AP54750 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC21.41■■□□□ 1.02
PDE1AP54750 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PDE1AP54750 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PDE1AP54750 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PDE1AP54750 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.41■■□□□ 1.02
PDE1AP54750 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PDE1AP54750 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC21.41■■□□□ 1.02
PDE1AP54750 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.41■■□□□ 1.02
PDE1AP54750 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.41■■□□□ 1.02
PDE1AP54750 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
PDE1AP54750 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC21.41■■□□□ 1.02
PDE1AP54750 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC21.41■■□□□ 1.02
PDE1AP54750 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC21.41■■□□□ 1.02
PDE1AP54750 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PDE1AP54750 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDE1AP54750 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDE1AP54750 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PDE1AP54750 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC21.41■■□□□ 1.02
PDE1AP54750 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.41■■□□□ 1.02
PDE1AP54750 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC21.4■■□□□ 1.02
PDE1AP54750 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC21.4■■□□□ 1.02
PDE1AP54750 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDE1AP54750 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDE1AP54750 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PDE1AP54750 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDE1AP54750 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDE1AP54750 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC21.4■■□□□ 1.02
PDE1AP54750 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDE1AP54750 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.4■■□□□ 1.02
PDE1AP54750 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
PDE1AP54750 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC21.4■■□□□ 1.02
PDE1AP54750 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC21.4■■□□□ 1.02
PDE1AP54750 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.4■■□□□ 1.02
PDE1AP54750 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.4■■□□□ 1.02
PDE1AP54750 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.4■■□□□ 1.02
PDE1AP54750 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.4■■□□□ 1.02
PDE1AP54750 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
PDE1AP54750 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
PDE1AP54750 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDE1AP54750 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
PDE1AP54750 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDE1AP54750 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDE1AP54750 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PDE1AP54750 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC21.4■■□□□ 1.02
PDE1AP54750 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PDE1AP54750 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDE1AP54750 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PDE1AP54750 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDE1AP54750 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PDE1AP54750 PMPCAP1-201ENST00000508114 1576 ntBASIC21.4■■□□□ 1.02
PDE1AP54750 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.4■■□□□ 1.02
PDE1AP54750 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC21.39■■□□□ 1.02
PDE1AP54750 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PDE1AP54750 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
PDE1AP54750 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PDE1AP54750 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC21.39■■□□□ 1.02
PDE1AP54750 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
PDE1AP54750 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC21.39■■□□□ 1.02
PDE1AP54750 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC21.39■■□□□ 1.02
PDE1AP54750 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PDE1AP54750 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PDE1AP54750 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
PDE1AP54750 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
PDE1AP54750 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
PDE1AP54750 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.39■■□□□ 1.01
PDE1AP54750 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDE1AP54750 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PDE1AP54750 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC21.39■■□□□ 1.01
PDE1AP54750 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDE1AP54750 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
PDE1AP54750 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PDE1AP54750 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDE1AP54750 AC009336.1-201ENST00000608941 1553 ntBASIC21.39■■□□□ 1.01
PDE1AP54750 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDE1AP54750 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PDE1AP54750 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDE1AP54750 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDE1AP54750 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDE1AP54750 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDE1AP54750 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDE1AP54750 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
PDE1AP54750 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDE1AP54750 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC21.38■■□□□ 1.01
PDE1AP54750 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDE1AP54750 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
PDE1AP54750 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms