Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
RAD23BP54727 HTR7P1-202ENST00000624664 4411 ntBASIC18.77■□□□□ 0.59
RAD23BP54727 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RAD23BP54727 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RAD23BP54727 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.77■□□□□ 0.59
RAD23BP54727 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.76■□□□□ 0.59
RAD23BP54727 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.76■□□□□ 0.59
RAD23BP54727 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
RAD23BP54727 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAD23BP54727 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAD23BP54727 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.76■□□□□ 0.59
RAD23BP54727 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAD23BP54727 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAD23BP54727 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.76■□□□□ 0.59
RAD23BP54727 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAD23BP54727 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAD23BP54727 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RAD23BP54727 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAD23BP54727 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.76■□□□□ 0.59
RAD23BP54727 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAD23BP54727 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RAD23BP54727 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.76■□□□□ 0.59
RAD23BP54727 AC002558.1-201ENST00000488906 803 ntBASIC18.76■□□□□ 0.59
RAD23BP54727 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.76■□□□□ 0.59
RAD23BP54727 AC109462.3-201ENST00000573934 613 ntBASIC18.76■□□□□ 0.59
RAD23BP54727 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.76■□□□□ 0.59
RAD23BP54727 AL591684.3-201ENST00000605187 298 ntBASIC18.76■□□□□ 0.59
RAD23BP54727 AL121772.3-201ENST00000610840 674 ntBASIC18.76■□□□□ 0.59
RAD23BP54727 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RAD23BP54727 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.76■□□□□ 0.59
RAD23BP54727 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RAD23BP54727 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RAD23BP54727 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAD23BP54727 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAD23BP54727 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAD23BP54727 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RAD23BP54727 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.76■□□□□ 0.59
RAD23BP54727 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.76■□□□□ 0.59
RAD23BP54727 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAD23BP54727 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAD23BP54727 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.75■□□□□ 0.59
RAD23BP54727 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RAD23BP54727 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAD23BP54727 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAD23BP54727 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAD23BP54727 KRT8P10-201ENST00000450021 1447 ntBASIC18.75■□□□□ 0.59
RAD23BP54727 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAD23BP54727 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAD23BP54727 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAD23BP54727 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
RAD23BP54727 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAD23BP54727 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAD23BP54727 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAD23BP54727 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.75■□□□□ 0.59
RAD23BP54727 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAD23BP54727 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.75■□□□□ 0.59
RAD23BP54727 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.75■□□□□ 0.59
RAD23BP54727 AD001527.2-201ENST00000622994 785 ntBASIC18.75■□□□□ 0.59
RAD23BP54727 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RAD23BP54727 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
RAD23BP54727 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAD23BP54727 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAD23BP54727 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.75■□□□□ 0.59
RAD23BP54727 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAD23BP54727 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAD23BP54727 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.74■□□□□ 0.59
RAD23BP54727 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RAD23BP54727 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAD23BP54727 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.74■□□□□ 0.59
RAD23BP54727 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAD23BP54727 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAD23BP54727 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.74■□□□□ 0.59
RAD23BP54727 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.74■□□□□ 0.59
RAD23BP54727 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.74■□□□□ 0.59
RAD23BP54727 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.74■□□□□ 0.59
RAD23BP54727 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAD23BP54727 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.74■□□□□ 0.59
RAD23BP54727 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.74■□□□□ 0.59
RAD23BP54727 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.74■□□□□ 0.59
RAD23BP54727 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.74■□□□□ 0.59
RAD23BP54727 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.74■□□□□ 0.59
RAD23BP54727 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.74■□□□□ 0.59
RAD23BP54727 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.74■□□□□ 0.59
RAD23BP54727 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAD23BP54727 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.74■□□□□ 0.59
RAD23BP54727 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RAD23BP54727 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAD23BP54727 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RAD23BP54727 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAD23BP54727 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.74■□□□□ 0.59
RAD23BP54727 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
RAD23BP54727 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAD23BP54727 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAD23BP54727 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAD23BP54727 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAD23BP54727 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAD23BP54727 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAD23BP54727 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAD23BP54727 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RAD23BP54727 AL353593.2-201ENST00000602529 1483 ntBASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms